RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 RSPO4Q2I0M5 234 aaPredicted RBP9.5□□□□□ -0.89
USF1-204ENST00000472217 CCDC40Q4G0X9 1142 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 RAB41Q5JT25 222 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 C10orf120Q5SQS8 335 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 BTBD8Q5XKL5 378 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 ARHGAP17Q68EM7 881 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 KLHL10Q6JEL2 608 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 TTI2Q6NXR4 508 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 KBTBD6Q86V97 674 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 PIGZQ86VD9 579 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 TTC30AQ86WT1 665 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 TMEM25Q86YD3 366 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 ETFBKMTQ8IXQ9 262 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 PHTF2Q8N3S3 785 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 CCDC33Q8N5R6 958 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 ALLCQ8N6M5 410 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 UBR7Q8N806 425 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 NAT16Q8N8M0 369 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 TSTD1Q8NFU3 115 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 CCDC26Q8TAB7 109 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 CEP63Q96MT8 703 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 METTL14Q9HCE5 456 aaKnown RBP9.5□□□□□ -0.89
USF1-204ENST00000472217 ARHGEF4Q9NR80 690 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 SEMA4GQ9NTN9 838 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 DLL3Q9NYJ7 618 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 NAGPAQ9UK23 515 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 MMP17Q9ULZ9 603 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 CTNND2Q9UQB3 1225 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.5□□□□□ -0.89
USF1-204ENST00000472217 USP3Q9Y6I4 520 aa9.5□□□□□ -0.89
USF1-204ENST00000472217 ATG2BQ96BY7 2078 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 SPTBN4Q9H254 2564 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 A0A0A0MRY4 1105 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.49□□□□□ -0.89
USF1-204ENST00000472217 TULP2O00295 520 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 TULP3O75386 442 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 KLF8O95600 359 aaPredicted RBP9.49□□□□□ -0.89
USF1-204ENST00000472217 TIE1P35590 1138 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 KIR2DL1P43626 348 aaPredicted RBP9.49□□□□□ -0.89
USF1-204ENST00000472217 PSEN1P49768 467 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 DGKEP52429 567 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 YWHAEP62258 255 aaKnown RBP9.49□□□□□ -0.89
USF1-204ENST00000472217 MRPS21P82921 87 aaKnown RBP9.49□□□□□ -0.89
USF1-204ENST00000472217 FOXK2Q01167 660 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 GOLGA8FQ08AF8 430 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 GOLGA8DPQ0D2H9 430 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 CSRP2Q16527 193 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 GOLGA7BQ2TAP0 167 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 ANO4Q32M45 955 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 SGO2Q562F6 1265 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 EMC10Q5UCC4 262 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 KLHDC10Q6PID8 442 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 Q6ZNB5 142 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 CACNA2D4Q7Z3S7 1137 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 ZNF276Q8N554 614 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 IL17RCQ8NAC3 791 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 ANKRD52Q8NB46 1076 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 NELFBQ8WX92 580 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 TPSD1Q9BZJ3 242 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 ZDHHC4Q9NPG8 344 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 CLIC5Q9NZA1 410 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 EBF1Q9UH73 591 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 DNMT3LQ9UJW3 386 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 LSM7Q9UK45 103 aaKnown RBP9.49□□□□□ -0.89
USF1-204ENST00000472217 TSPAN16Q9UKR8 245 aa9.49□□□□□ -0.89
USF1-204ENST00000472217 CIZ1Q9ULV3 898 aaPredicted RBP9.49□□□□□ -0.89
USF1-204ENST00000472217 BICDL2A1A5D9 508 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 PRR5-ARHGAP8B1AHC4 643 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 NEDD8-MDP1E9PL57 170 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 SGK1O00141 431 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 XPO1O14980 1071 aaKnown RBP9.48□□□□□ -0.89
USF1-204ENST00000472217 DCLK1O15075 740 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 TRIM24O15164 1050 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 PMM2O15305 246 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 STC2O76061 302 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 EPN2O95208 641 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 RALAP11233 206 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 HNRNPLP14866 589 aaKnown RBP eCLIP9.48□□□□□ -0.89
USF1-204ENST00000472217 CD19P15391 556 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 TBXAS1P24557 533 aaPredicted RBP9.48□□□□□ -0.89
USF1-204ENST00000472217 TNFRSF4P43489 277 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 PLA2G4AP47712 749 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 TKTL1P51854 596 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 BCAT1P54687 386 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 STX17P56962 302 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 SLC8A3P57103 927 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 ARHGAP8P85298 464 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 PDE4CQ08493 712 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 CRY1Q16526 586 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 PLK5Q496M5 336 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 HSF5Q4G112 596 aaPredicted RBP9.48□□□□□ -0.89
USF1-204ENST00000472217 C10orf76Q5T2E6 689 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 ANO7Q6IWH7 933 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 FOXR2Q6PJQ5 311 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 TMEM92Q6UXU6 159 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 PRR23CQ6ZRP0 262 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 TPGS1Q6ZTW0 290 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 DGLUCYQ7Z3D6 616 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 TADA2BQ86TJ2 420 aa9.48□□□□□ -0.89
USF1-204ENST00000472217 RASSF3Q86WH2 238 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms