RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 MBPP02686 304 aaPredicted RBP3.77□□□□□ -1.81
COPS3-206ENST00000471414 PEX2P28328 305 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 HOXD9P28356 352 aaPredicted RBP3.77□□□□□ -1.81
COPS3-206ENST00000471414 FOXG1P55316 489 aaPredicted RBP3.77□□□□□ -1.81
COPS3-206ENST00000471414 KRTAP10-9P60411 292 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 GPC5P78333 572 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 ST3GAL2Q16842 350 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 TMTC4Q5T4D3 741 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 MZT2AQ6P582 158 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 CCDC149Q6ZUS6 474 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 UNC13DQ70J99 1090 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 TECPR1Q7Z6L1 1165 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 UBE2Q1Q7Z7E8 422 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 YAF2Q8IY57 180 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 MYO1HQ8N1T3 1032 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 C12orf76Q8N812 135 aaPredicted RBP3.77□□□□□ -1.81
COPS3-206ENST00000471414 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.77□□□□□ -1.81
COPS3-206ENST00000471414 WIPF2Q8TF74 440 aaPredicted RBP3.77□□□□□ -1.81
COPS3-206ENST00000471414 VCPIP1Q96JH7 1222 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 FAM227BQ96M60 508 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 SIGLEC11Q96RL6 698 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 ZNF287Q9HBT7 754 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 DNAJB11Q9UBS4 358 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 OGDHLQ9ULD0 1010 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 FZD4Q9ULV1 537 aa3.77□□□□□ -1.81
COPS3-206ENST00000471414 FNDC1Q4ZHG4 1894 aaPredicted RBP3.76□□□□□ -1.81
COPS3-206ENST00000471414 A0A087WZ62 844 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 DSCR3O14972 297 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 CBFA2T3O75081 653 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 GCATO75600 419 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 INMTO95050 263 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 MT-ND5P03915 603 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 CD19P15391 556 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 CARSP49589 748 aaKnown RBP3.76□□□□□ -1.81
COPS3-206ENST00000471414 MTHFSP49914 203 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 ITGA8P53708 1063 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 MTAPQ13126 283 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 KCNB1Q14721 858 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 RABEP1Q15276 862 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 KIAA0753Q2KHM9 967 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 PXDC1Q5TGL8 231 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 TMEM65Q6PI78 240 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 RANBP10Q6VN20 620 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 DCDC5Q6ZRR9 648 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 PRSS3P2Q8NHM4 247 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 MBD3L2Q8NHZ7 208 aaPredicted RBP3.76□□□□□ -1.81
COPS3-206ENST00000471414 TTC8Q8TAM2 541 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 OSR1Q8TAX0 266 aaPredicted RBP3.76□□□□□ -1.81
COPS3-206ENST00000471414 TSR2Q969E8 191 aaKnown RBP3.76□□□□□ -1.81
COPS3-206ENST00000471414 HMCESQ96FZ2 354 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 STRBPQ96SI9 672 aaKnown RBP3.76□□□□□ -1.81
COPS3-206ENST00000471414 DDX21Q9NR30 783 aaKnown RBP eCLIP3.76□□□□□ -1.81
COPS3-206ENST00000471414 TRNAU1APQ9NX07 287 aaKnown RBP3.76□□□□□ -1.81
COPS3-206ENST00000471414 OBP2AQ9NY56 170 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 MTMR4Q9NYA4 1195 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 NKX1-2Q9UD57 310 aaPredicted RBP3.76□□□□□ -1.81
COPS3-206ENST00000471414 STEAP1Q9UHE8 339 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 HDAC9Q9UKV0 1011 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 SLC27A6Q9Y2P4 619 aa3.76□□□□□ -1.81
COPS3-206ENST00000471414 SPATA31A1Q5TZJ5 1347 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.75□□□□□ -1.81
COPS3-206ENST00000471414 SOCS2O14508 198 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 ADAM10O14672 748 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 MGEA5O60502 916 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 TLR2O60603 784 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 PRAMEF2O60811 474 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 PRF1P14222 555 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 ZKSCAN1P17029 563 aaPredicted RBP3.75□□□□□ -1.81
COPS3-206ENST00000471414 TPH1P17752 444 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 ADRA1DP25100 572 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 RBL1P28749 1068 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 NTSR1P30989 418 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 SLC14A1Q13336 389 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 DNASE1L3Q13609 305 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 KCNAB1Q14722 419 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 TRIM71Q2Q1W2 868 aaKnown RBP3.75□□□□□ -1.81
COPS3-206ENST00000471414 GFOD2Q3B7J2 385 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 GRHL2Q6ISB3 625 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 VSTM1Q6UX27 236 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 MRPL10Q7Z7H8 261 aaKnown RBP3.75□□□□□ -1.81
COPS3-206ENST00000471414 CNGA4Q8IV77 575 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 NRACQ8N912 160 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 P2RY11Q96G91 374 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 HIC2Q96JB3 615 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 SNX22Q96L94 193 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 WDR24Q96S15 920 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 BRIP1Q9BX63 1249 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 UNKQ9C0B0 810 aaKnown RBP3.75□□□□□ -1.81
COPS3-206ENST00000471414 HPSEQ9Y251 543 aa3.75□□□□□ -1.81
COPS3-206ENST00000471414 FRMPD2Q68DX3 1309 aaPredicted RBP3.74□□□□□ -1.81
COPS3-206ENST00000471414 GOLGA6CA6NDK9 693 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 GOLGA6BA6NDN3 693 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 CLCA1A8K7I4 914 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 CLIC1O00299 241 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 TRIM38O00635 465 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 MAP4K4O95819 1239 aaPredicted RBP3.74□□□□□ -1.81
COPS3-206ENST00000471414 GOLGA6DP0CG33 693 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 CTSAP10619 480 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 LINC00205P59089 165 aa3.74□□□□□ -1.81
COPS3-206ENST00000471414 EIF4A1P60842 406 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms