RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 DFFAO00273 331 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 PRPF4O43172 522 aaKnown RBP eCLIP10.87□□□□□ -0.673e-7■■■■□ 24.7
RRP1B-202ENST00000470886 FBXO21O94952 628 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 ATP6V1C1P21283 382 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 MAP4P27816 1152 aaKnown RBP10.87□□□□□ -0.67
RRP1B-202ENST00000470886 TCF7P36402 384 aaPredicted RBP10.87□□□□□ -0.67
RRP1B-202ENST00000470886 NOVP48745 357 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 PRKAA1Q13131 559 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 TATDN1Q6P1N9 297 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 UNC45BQ8IWX7 931 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 ZC3H3Q8IXZ2 948 aaKnown RBP10.87□□□□□ -0.67
RRP1B-202ENST00000470886 PRPF31Q8WWY3 499 aaKnown RBP10.87□□□□□ -0.67
RRP1B-202ENST00000470886 RXFP2Q8WXD0 754 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 TMEM39BQ9GZU3 492 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 LRMDAQ9H2I8 198 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 SSU72Q9NP77 194 aaKnown RBP10.87□□□□□ -0.67
RRP1B-202ENST00000470886 UTP6Q9NYH9 597 aaKnown RBP10.87□□□□□ -0.67
RRP1B-202ENST00000470886 LAMB1P07942 1786 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 E5RI56 91 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 CLPTM1O96005 669 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 HMGCRP04035 888 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 RARBP10826 455 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 FCGR1AP12314 374 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 GNL1P36915 607 aaPredicted RBP10.87□□□□□ -0.67
RRP1B-202ENST00000470886 TAF6P49848 677 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 PEX5P50542 639 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 NCKAP1LP55160 1127 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 MAMLD1Q13495 774 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 ZNF235Q14590 738 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 TRABD2AQ86V40 505 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 KYQ8NBH2 561 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 DLG3Q92796 817 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 ACSF2Q96CM8 615 aaPredicted RBP10.87□□□□□ -0.67
RRP1B-202ENST00000470886 FAM210AQ96ND0 272 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 ACSS3Q9H6R3 686 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 MYOZ2Q9NPC6 264 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 SLC39A10Q9ULF5 831 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 ANKRD6Q9Y2G4 727 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 BCORQ6W2J9 1755 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 SIGLEC16A6NMB1 481 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 F5H423 210 aaPredicted RBP10.87□□□□□ -0.67
RRP1B-202ENST00000470886 GRAP2O75791 330 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 PYGLP06737 847 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 XIAPP98170 497 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 DPYSL3Q14195 570 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 KCNT1Q5JUK3 1230 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 SPANXN3Q5MJ09 141 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 SYCP2LQ5T4T6 812 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 NOTUMQ6P988 496 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 FAM43BQ6ZT52 329 aaPredicted RBP10.87□□□□□ -0.67
RRP1B-202ENST00000470886 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.87□□□□□ -0.67
RRP1B-202ENST00000470886 NR1H4Q96RI1 486 aaPredicted RBP10.87□□□□□ -0.67
RRP1B-202ENST00000470886 TBC1D10AQ9BXI6 508 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 ST6GALNAC4Q9H4F1 302 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 LGALS13Q9UHV8 139 aa10.87□□□□□ -0.67
RRP1B-202ENST00000470886 KBTBD13C9JR72 458 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 H0Y626 953 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 EDF1O60869 148 aaKnown RBP10.86□□□□□ -0.67
RRP1B-202ENST00000470886 TRIM16O95361 564 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 PGAM1P18669 254 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 ADRA1DP25100 572 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 MAP3K7CLP57077 242 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 KCNA1Q09470 495 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 ACBD5Q5T8D3 534 aaPredicted RBP10.86□□□□□ -0.67
RRP1B-202ENST00000470886 EP400NLQ6ZTU2 488 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 RNF135Q8IUD6 432 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 ALG3Q92685 438 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 RRN3Q9NYV6 651 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 BARX2Q9UMQ3 279 aaPredicted RBP10.86□□□□□ -0.67
RRP1B-202ENST00000470886 NFIBO00712 420 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 BIRC5O15392 142 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 TBC1D4O60343 1298 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 RBP1P09455 135 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 CYP2C9P11712 490 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 SSTR1P30872 391 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 RPA3P35244 121 aaPredicted RBP10.86□□□□□ -0.67
RRP1B-202ENST00000470886 SLC1A6P48664 564 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 HK2P52789 917 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 BACE1P56817 501 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 NUP107P57740 925 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 NSUN2Q08J23 767 aaKnown RBP eCLIP10.86□□□□□ -0.67
RRP1B-202ENST00000470886 PDAP1Q13442 181 aaKnown RBP10.86□□□□□ -0.67
RRP1B-202ENST00000470886 R3HDM1Q15032 1099 aaKnown RBP10.86□□□□□ -0.67
RRP1B-202ENST00000470886 BBS12Q6ZW61 710 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.86□□□□□ -0.67
RRP1B-202ENST00000470886 SHISA4Q96DD7 197 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 TMEM237Q96Q45 408 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 TRIM54Q9BYV2 358 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 NCKIPSDQ9NZQ3 722 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 AP4E1Q9UPM8 1137 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 ZMYM2Q9UBW7 1377 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 MYH2Q9UKX2 1941 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 TNFAIP8O95379 198 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 KDELR1P24390 212 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 PSMA4P25789 261 aaKnown RBP10.86□□□□□ -0.67
RRP1B-202ENST00000470886 PPATQ06203 517 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 BNIP1Q12981 228 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 C2CD6Q53TS8 623 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 DCAF6Q58WW2 860 aa10.86□□□□□ -0.67
RRP1B-202ENST00000470886 SMYD5Q6GMV2 418 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms