RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 NOLC1Q14978 699 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRAIP-202ENST00000469027 NCAPHQ15003 741 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 CALCRLQ16602 461 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 NFE2Q16621 373 aaPredicted RBP11.32□□□□□ -0.6
TRAIP-202ENST00000469027 SKIDA1Q1XH10 827 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 TMPRSS6Q8IU80 811 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 NSUN7Q8NE18 718 aaKnown RBP11.32□□□□□ -0.6
TRAIP-202ENST00000469027 ZBTB45Q96K62 511 aaPredicted RBP11.32□□□□□ -0.6
TRAIP-202ENST00000469027 DEPDC7Q96QD5 511 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 CCNL2Q96S94 520 aaPredicted RBP11.32□□□□□ -0.6
TRAIP-202ENST00000469027 PYM1Q9BRP8 204 aaKnown RBP11.32□□□□□ -0.6
TRAIP-202ENST00000469027 ZNF768Q9H5H4 540 aaKnown RBP11.32□□□□□ -0.6
TRAIP-202ENST00000469027 ASCL3Q9NQ33 180 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 TRPM5Q9NZQ8 1165 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.32□□□□□ -0.6
TRAIP-202ENST00000469027 MYH11P35749 1972 aa11.31□□□□□ -0.6
TRAIP-202ENST00000469027 SYNCRIPO60506 623 aaKnown RBP11.31□□□□□ -0.6
TRAIP-202ENST00000469027 MBL2P11226 248 aaPredicted RBP11.31□□□□□ -0.6
TRAIP-202ENST00000469027 CYP11B2P19099 503 aa11.31□□□□□ -0.6
TRAIP-202ENST00000469027 E2F1Q01094 437 aa11.31□□□□□ -0.6
TRAIP-202ENST00000469027 C3orf38Q5JPI3 329 aa11.31□□□□□ -0.6
TRAIP-202ENST00000469027 WSCD1Q658N2 575 aa11.31□□□□□ -0.6
TRAIP-202ENST00000469027 CPLX2Q6PUV4 134 aaKnown RBP11.31□□□□□ -0.6
TRAIP-202ENST00000469027 DDX42Q86XP3 938 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRAIP-202ENST00000469027 KIAA1958Q8N8K9 716 aa11.31□□□□□ -0.6
TRAIP-202ENST00000469027 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRAIP-202ENST00000469027 SAP25Q8TEE9 199 aa11.31□□□□□ -0.6
TRAIP-202ENST00000469027 SLC25A18Q9H1K4 315 aa11.31□□□□□ -0.6
TRAIP-202ENST00000469027 PCED1AQ9H1Q7 454 aa11.31□□□□□ -0.6
TRAIP-202ENST00000469027 OSGEPQ9NPF4 335 aa11.31□□□□□ -0.6
TRAIP-202ENST00000469027 SSUH2Q9Y2M2 353 aa11.31□□□□□ -0.6
TRAIP-202ENST00000469027 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.31□□□□□ -0.6
TRAIP-202ENST00000469027 PRRT4C9JH25 899 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 GFRA2O00451 464 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 YKT6O15498 198 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 HOXC11O43248 304 aaPredicted RBP11.3□□□□□ -0.6
TRAIP-202ENST00000469027 TRAK2O60296 914 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 MED24O75448 989 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 CTDNEP1O95476 244 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 ITGB2P05107 769 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 TXKP42681 527 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 SLC7A9P82251 487 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 DAB2P98082 770 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 BECN1Q14457 450 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 KIFAP3Q92845 792 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 SKA1Q96BD8 255 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 FAM212AQ96EL1 285 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 SGF29Q96ES7 293 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 SEMA3CQ99985 751 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 RNF38Q9H0F5 515 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 PLEKHA5Q9HAU0 1116 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 SPHK2Q9NRA0 654 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 TMPRSS4Q9NRS4 437 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 STON1Q9Y6Q2 735 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 TCHHQ07283 1943 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 F8P00451 2351 aa11.3□□□□□ -0.6
TRAIP-202ENST00000469027 NEDD8-MDP1E9PL57 170 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 ABLIM1O14639 778 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 NEMFO60524 1076 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 CSO75390 466 aaKnown RBP11.29□□□□□ -0.6
TRAIP-202ENST00000469027 AGFG2O95081 481 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 GJB6O95452 261 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 PFKLP17858 780 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 PROZP22891 400 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 PAX3P23760 479 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 CD27P26842 260 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 EPHA8P29322 1005 aaPredicted RBP11.29□□□□□ -0.6
TRAIP-202ENST00000469027 ACSL1P33121 698 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 ARRB1P49407 418 aaPredicted RBP11.29□□□□□ -0.6
TRAIP-202ENST00000469027 PEX3P56589 373 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 MYL7Q01449 175 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 CLN3Q13286 438 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 FOXR1Q6PIV2 292 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 CATSPER3Q86XQ3 398 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 TMEM25Q86YD3 366 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 SRRM1Q8IYB3 904 aaKnown RBP11.29□□□□□ -0.6
TRAIP-202ENST00000469027 BIRC7Q96CA5 298 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 OTUB2Q96DC9 234 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 XPO6Q96QU8 1125 aaKnown RBP11.29□□□□□ -0.6
TRAIP-202ENST00000469027 TMEM60Q9H2L4 133 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 SATB2Q9UPW6 733 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 SH3BP1Q9Y3L3 701 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 CYP46A1Q9Y6A2 500 aa11.29□□□□□ -0.6
TRAIP-202ENST00000469027 TTC26A0AVF1 554 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 LACTBL1A8MY62 500 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 CDKL5O76039 1030 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 CLTAP09496 248 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 XBP1P17861 261 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 ACP1P24666 158 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 KRT2P35908 639 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 BCAT1P54687 386 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 GRIN1Q05586 938 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 ZBTB6Q15916 424 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 C9orf57Q5W0N0 161 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 ZNF787Q6DD87 383 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 SPATA2LQ8IUW3 424 aaPredicted RBP11.28□□□□□ -0.6
TRAIP-202ENST00000469027 TM6SF1Q9BZW5 370 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 TRIM9Q9C026 710 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 TUFT1Q9NNX1 390 aa11.28□□□□□ -0.6
TRAIP-202ENST00000469027 ABCB6Q9NP58 842 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms