RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 ADORA2BP29275 332 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 PGFP49763 221 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 YWHAEP62258 255 aaKnown RBP11.77□□□□□ -0.53
COL4A6-205ENST00000468338 GCNT1Q02742 428 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 CETN1Q12798 172 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 RUNX3Q13761 415 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 UBXN2BQ14CS0 331 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 PDGFRLQ15198 375 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 ITPRIPL2Q3MIP1 535 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 OXLD1Q5BKU9 147 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 TXNDC11Q6PKC3 985 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 GPRIN1Q7Z2K8 1008 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 MAML2Q8IZL2 1156 aaPredicted RBP11.77□□□□□ -0.53
COL4A6-205ENST00000468338 ZNF276Q8N554 614 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 ANKRD52Q8NB46 1076 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 SH3RF2Q8TEC5 729 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 OSCP1Q8WVF1 389 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 FBXO32Q969P5 355 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 NT5C1BQ96P26 610 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 KIAA1257Q9ULG3 409 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 CNTN6Q9UQ52 1028 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 SCML2Q9UQR0 700 aa11.77□□□□□ -0.53
COL4A6-205ENST00000468338 RIF1Q5UIP0 2472 aaKnown RBP11.76□□□□□ -0.53
COL4A6-205ENST00000468338 MYOFQ9NZM1 2061 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 PROB1E7EW31 1015 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 LEFTY2O00292 366 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 COCHO43405 550 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 PAEPP09466 180 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 SOX9P48436 509 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 ZNF132P52740 706 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 LRMPQ12912 555 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 ANGPT1Q15389 498 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 PKDCCQ504Y2 493 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 RAB41Q5JT25 222 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 HECTD3Q5T447 861 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 TRIM68Q6AZZ1 485 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 TTC30AQ86WT1 665 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 C1orf210Q8IVY1 113 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 KAT5Q92993 513 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 JAKMIP2Q96AA8 810 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 IER2Q9BTL4 223 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 CHRDQ9H2X0 955 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 EBF3Q9H4W6 596 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 CYLDQ9NQC7 956 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 GMIPQ9P107 970 aa11.76□□□□□ -0.53
COL4A6-205ENST00000468338 GTPBP10A4D1E9 387 aaKnown RBP11.75□□□□□ -0.53
COL4A6-205ENST00000468338 RNF225M0QZC1 329 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-205ENST00000468338 O00370 1275 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 TRDMT1O14717 391 aaKnown RBP11.75□□□□□ -0.53
COL4A6-205ENST00000468338 VDRP11473 427 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 ARSAP15289 507 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 NBL1P41271 181 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 KPNA1P52294 538 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-205ENST00000468338 IFRD2Q12894 506 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-205ENST00000468338 CCINQ13939 588 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 GAS6Q14393 721 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 CC2D1AQ6P1N0 951 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-205ENST00000468338 KLHDC10Q6PID8 442 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 CCDC186Q7Z3E2 898 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 PIGZQ86VD9 579 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 ARHGEF19Q8IW93 802 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 PPM1KQ8N3J5 372 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 BAP1Q92560 729 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 NELL1Q92832 810 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 KCTD12Q96CX2 325 aaKnown RBP11.75□□□□□ -0.53
COL4A6-205ENST00000468338 CNOT6LQ96LI5 555 aaKnown RBP11.75□□□□□ -0.53
COL4A6-205ENST00000468338 KREMEN1Q96MU8 473 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 ZSWIM1Q9BR11 485 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 LINC00597Q9H2U6 94 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 THAP9Q9H5L6 903 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 CCSER2Q9H7U1 834 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 ECT2Q9H8V3 914 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 TLR8Q9NR97 1041 aaKnown RBP11.75□□□□□ -0.53
COL4A6-205ENST00000468338 OSER1Q9NX31 292 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 DUS2Q9NX74 493 aaKnown RBP11.75□□□□□ -0.53
COL4A6-205ENST00000468338 CPQQ9Y646 472 aa11.75□□□□□ -0.53
COL4A6-205ENST00000468338 PTPRZ1P23471 2315 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-205ENST00000468338 MYO16Q9Y6X6 1858 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 ATG2BQ96BY7 2078 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 FAM186AA6NE01 2351 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 GREM1O60565 184 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 TLR5O60602 858 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 ABL1P00519 1130 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 GJA4P35212 333 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 SEC13P55735 322 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 GAB4Q2WGN9 574 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 SGO2Q562F6 1265 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 TMEM196Q5HYL7 178 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 DGKKQ5KSL6 1271 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 PM20D1Q6GTS8 502 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 TMEM270Q6UE05 265 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 LCLAT1Q6UWP7 414 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 RRAGAQ7L523 313 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 SCD5Q86SK9 330 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 DDX42Q86XP3 938 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL4A6-205ENST00000468338 ADGRG2Q8IZP9 1017 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 SYNPOQ8N3V7 929 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 TTC8Q8TAM2 541 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 TFAP2BQ92481 460 aa11.74□□□□□ -0.53
COL4A6-205ENST00000468338 ATOH1Q92858 354 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms