RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 NSUN6Q8TEA1 469 aaKnown RBP4.77□□□□□ -1.65
SSR3-204ENST00000467733 RUBCNQ92622 972 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 CHMP4CQ96CF2 233 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 NECTIN4Q96NY8 510 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 IWS1Q96ST2 819 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 RTP3Q9BQQ7 232 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 BOCQ9BWV1 1114 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 MAF1Q9H063 256 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 SMOC2Q9H3U7 446 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 POMKQ9H5K3 350 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 SLC2A4RGQ9NR83 387 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 CDC42EP3Q9UKI2 254 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 STX8Q9UNK0 236 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 PLAAQ9Y263 795 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 HELZ2Q9BYK8 2649 aaKnown RBP4.77□□□□□ -1.65
SSR3-204ENST00000467733 ITPR1Q14643 2758 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 LOC400499M0QZD8 3231 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 NAV2Q8IVL1 2488 aa4.77□□□□□ -1.65
SSR3-204ENST00000467733 DMXL2Q8TDJ6 3036 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 SCDO00767 359 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 KCNK3O14649 394 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 PER2O15055 1255 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 ANP32CO43423 234 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 PPFIA4O75335 1185 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 DNAJC8O75937 253 aaPredicted RBP4.76□□□□□ -1.65
SSR3-204ENST00000467733 SLC3A2P08195 630 aaKnown RBP4.76□□□□□ -1.65
SSR3-204ENST00000467733 GHRP10912 638 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 GNAT2P19087 354 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 BMP5P22003 454 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 PTGS2P35354 604 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 TECP42680 631 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 NOVP48745 357 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 IRF9Q00978 393 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 COL10A1Q03692 680 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 LPIN1Q14693 890 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 ACAP1Q15027 740 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 PIK3R6Q5UE93 754 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 ABHD17CQ6PCB6 329 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 Q6ZPA2 131 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 TDRD5Q8NAT2 981 aaKnown RBP4.76□□□□□ -1.65
SSR3-204ENST00000467733 CHST14Q8NCH0 376 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 FRAT1Q92837 279 aaPredicted RBP4.76□□□□□ -1.65
SSR3-204ENST00000467733 NINJ1Q92982 152 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 KIF1BPQ96EK5 621 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 SPATA33Q96N06 139 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 C16orf70Q9BSU1 422 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 OR10A5Q9H207 317 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 BOLA2Q9H3K6 86 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 KCNH7Q9NS40 1196 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 COL20A1Q9P218 1284 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.76□□□□□ -1.65
SSR3-204ENST00000467733 R4GN57 208 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 LAMA4Q16363 1823 aa4.76□□□□□ -1.65
SSR3-204ENST00000467733 TLDC2A0PJX2 215 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 TSPY2A6NKD2 308 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 ENPP3O14638 875 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 GPAA1O43292 621 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 PI15O43692 258 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 NMT2O60551 498 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 CLSTN1O94985 981 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 GGPS1O95749 300 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 CHRNA1P02708 482 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 C4BPAP04003 597 aaKnown RBP4.75□□□□□ -1.65
SSR3-204ENST00000467733 LGALS2P05162 132 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 JMJD7P0C870 316 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 ARP10275 920 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 UBA1P22314 1058 aaKnown RBP4.75□□□□□ -1.65
SSR3-204ENST00000467733 MTHFRP42898 656 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 NEK4P51957 841 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 ITIH3Q06033 890 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 PPARAQ07869 468 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 MGAT3Q09327 533 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 RIN1Q13671 783 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 ZNF460Q14592 562 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 HSDL1Q3SXM5 330 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 USH1GQ495M9 461 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 CELF3Q5SZQ8 465 aaKnown RBP4.75□□□□□ -1.65
SSR3-204ENST00000467733 LRCH2Q5VUJ6 765 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 KANK2Q63ZY3 851 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 LAIR1Q6GTX8 287 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 GRAMD4Q6IC98 578 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 KCNV1Q6PIU1 500 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 TSHZ1Q6ZSZ6 1077 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 LMBR1Q8WVP7 490 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 LPPQ93052 612 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 TMEM176AQ96HP8 235 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 TAAR1Q96RJ0 339 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 RMDN3Q96TC7 470 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 APOL5Q9BWW9 433 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 SLKQ9H2G2 1235 aaPredicted RBP4.75□□□□□ -1.65
SSR3-204ENST00000467733 RNPEPQ9H4A4 650 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 PCIF1Q9H4Z3 704 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 ERVK-5Q9HDB9 667 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 IL17RBQ9NRM6 502 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 CDH22Q9UJ99 828 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 DUSP12Q9UNI6 340 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 MYH15Q9Y2K3 1946 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 EVPLQ92817 2033 aa4.75□□□□□ -1.65
SSR3-204ENST00000467733 ABCB11O95342 1321 aa4.74□□□□□ -1.65
SSR3-204ENST00000467733 FRMPD2Q68DX3 1309 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms