RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 GAS2L3Q86XJ1 694 aa11.59□□□□□ -0.55
MSH5-212ENST00000467319 DDX42Q86XP3 938 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■□□□□ 8.3
MSH5-212ENST00000467319 GPIHBP1Q8IV16 184 aa11.59□□□□□ -0.55
MSH5-212ENST00000467319 FMNL3Q8IVF7 1028 aa11.59□□□□□ -0.55
MSH5-212ENST00000467319 IRF7Q92985 503 aa11.59□□□□□ -0.55
MSH5-212ENST00000467319 IQCDQ96DY2 449 aa11.59□□□□□ -0.55
MSH5-212ENST00000467319 PIWIL1Q96J94 861 aaKnown RBP11.59□□□□□ -0.55
MSH5-212ENST00000467319 CDK5RAP1Q96SZ6 601 aaKnown RBP11.59□□□□□ -0.55
MSH5-212ENST00000467319 FAM83CQ9BQN1 747 aa11.59□□□□□ -0.55
MSH5-212ENST00000467319 DDX23Q9BUQ8 820 aaKnown RBP11.59□□□□□ -0.55
MSH5-212ENST00000467319 KLF16Q9BXK1 252 aaPredicted RBP11.59□□□□□ -0.55
MSH5-212ENST00000467319 HPS4Q9NQG7 708 aa11.59□□□□□ -0.55
MSH5-212ENST00000467319 ARHGEF3Q9NR81 526 aa11.59□□□□□ -0.55
MSH5-212ENST00000467319 SMPD4Q9NXE4 827 aa11.59□□□□□ -0.55
MSH5-212ENST00000467319 CEP83Q9Y592 693 aa11.59□□□□□ -0.55
MSH5-212ENST00000467319 KMT2EQ8IZD2 1858 aa11.59□□□□□ -0.55
MSH5-212ENST00000467319 ZNF318Q5VUA4 2279 aa11.58□□□□□ -0.55
MSH5-212ENST00000467319 KRBA1A5PL33 1030 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 TMEM221A6NGB7 291 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 M0R296 226 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 PIK3R2O00459 728 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 ZNF263O14978 683 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 MDM4O15151 490 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 AP5Z1O43299 807 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 LTFP02788 710 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 CYP1A1P04798 512 aaPredicted RBP11.58□□□□□ -0.56
MSH5-212ENST00000467319 FYNP06241 537 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 TPM3P06753 285 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 MBL2P11226 248 aaPredicted RBP11.58□□□□□ -0.56
MSH5-212ENST00000467319 RALAP11233 206 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 FERP16591 822 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 ATP5C1P36542 298 aaKnown RBP11.58□□□□□ -0.56
MSH5-212ENST00000467319 PRKCIP41743 596 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 GABRB2P47870 512 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 PDGFRLQ15198 375 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 C10orf120Q5SQS8 335 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 BSPRYQ5W0U4 402 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 TRIM72Q6ZMU5 477 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 IRF2BP2Q7Z5L9 587 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 BMP8AQ7Z5Y6 402 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 TADA2BQ86TJ2 420 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 YAF2Q8IY57 180 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 TMEM35BQ8NCS4 154 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 WBP2Q969T9 261 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 CHFRQ96EP1 664 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 ZFYVE19Q96K21 471 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 PPP1R13BQ96KQ4 1090 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 NOX5Q96PH1 765 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 RBSNQ9H1K0 784 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 BRD9Q9H8M2 597 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 ST7Q9NRC1 585 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 OLA1Q9NTK5 396 aaKnown RBP11.58□□□□□ -0.56
MSH5-212ENST00000467319 AIPL1Q9NZN9 384 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 CFAP97Q9P2B7 532 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 DNMT3LQ9UJW3 386 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 F5P12259 2224 aa11.58□□□□□ -0.56
MSH5-212ENST00000467319 E2F8A0AVK6 867 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 CBFA2T2O43439 604 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 GPR37L1O60883 481 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 SCNN1AP37088 669 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 MLLT6P55198 1093 aaPredicted RBP11.57□□□□□ -0.56
MSH5-212ENST00000467319 CENPCQ03188 943 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 MLF2Q15773 248 aaPredicted RBP11.57□□□□□ -0.56
MSH5-212ENST00000467319 EML3Q32P44 896 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 NAA35Q5VZE5 725 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 CWF19L1Q69YN2 538 aaKnown RBP11.57□□□□□ -0.56
MSH5-212ENST00000467319 Q6ZNB5 142 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 FAM183BPQ6ZVS7 135 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 SLC26A9Q7LBE3 791 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 VSTM4Q8IW00 320 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 SCUBE3Q8IX30 993 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 SIX5Q8N196 739 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 IPO4Q8TEX9 1081 aaKnown RBP11.57□□□□□ -0.56
MSH5-212ENST00000467319 OSCP1Q8WVF1 389 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 SYN2Q92777 582 aaPredicted RBP11.57□□□□□ -0.56
MSH5-212ENST00000467319 PCDHB18PQ96TA0 734 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 TRIM62Q9BVG3 475 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 NUP58Q9BVL2 599 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 C1QTNF1Q9BXJ1 281 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 MIS12Q9H081 205 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 ABCC13Q9NSE7 274 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 ASNSD1Q9NWL6 643 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 THG1LQ9NWX6 298 aaKnown RBP11.57□□□□□ -0.56
MSH5-212ENST00000467319 MARCH2Q9P0N8 246 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 NUDT5Q9UKK9 219 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 WNT6Q9Y6F9 365 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 KIAA1549LQ6ZVL6 1849 aa11.57□□□□□ -0.56
MSH5-212ENST00000467319 FAM86C2PA6NEL3 165 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 OTOL1A6NHN0 477 aaPredicted RBP11.56□□□□□ -0.56
MSH5-212ENST00000467319 PRR33A8MZF0 331 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 STC2O76061 302 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 PDGFBP01127 241 aaPredicted RBP11.56□□□□□ -0.56
MSH5-212ENST00000467319 IGLV3-25P01717 112 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 IGLV3-27P01718 113 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 GLI1P08151 1106 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 CCDC172P0C7W6 258 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 UNGP13051 313 aaPredicted RBP11.56□□□□□ -0.56
MSH5-212ENST00000467319 ARSAP15289 507 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 MMP8P22894 467 aa11.56□□□□□ -0.56
MSH5-212ENST00000467319 GSCP56915 257 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms