RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 MEX3CQ5U5Q3 659 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 KLHDC7AQ5VTJ3 777 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 PPP4R4Q6NUP7 873 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 HIBCHQ6NVY1 386 aaPredicted RBP5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 CRELD2Q6UXH1 353 aaPredicted RBP5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 ZNF813Q6ZN06 617 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 TOGARAM2Q6ZUX3 1019 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 KRT28Q7Z3Y7 464 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 ABRAQ8N0Z2 381 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 MPP5Q8N3R9 675 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 COQ8BQ96D53 544 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 RIPOR3Q96MK2 946 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 FAM118BQ9BPY3 351 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 PNPLA8Q9NP80 782 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 KLHL13Q9P2N7 655 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 VPS51Q9UID3 782 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 SCAF8Q9UPN6 1271 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 H7C4K7 107 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 INSIG1O15503 277 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 MYCLP12524 364 aaPredicted RBP5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 TNFSF4P23510 183 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 IL1R2P27930 398 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 ADORA2AP29274 412 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 TIAL1Q01085 375 aaKnown RBP eCLIP5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 ARHGEF7Q14155 803 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 LONRF1Q17RB8 773 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 ZNF260Q3ZCT1 412 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 PLAG1Q6DJT9 500 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 CAND1Q86VP6 1230 aaKnown RBP5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 RSPRY1Q96DX4 576 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 PPP1R9BQ96SB3 815 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 ELAC2Q9BQ52 826 aaKnown RBP5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 STK31Q9BXU1 1019 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 CIPCQ9C0C6 399 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 GJB4Q9NTQ9 266 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 TRNAU1APQ9NX07 287 aaKnown RBP5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 SNX13Q9Y5W8 968 aa5.33□□□□□ -1.56
PRPF40A-205ENST00000467114 SOCS2O14508 198 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 FCHO1O14526 889 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 CD3EAPO15446 510 aaKnown RBP5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 FGBP02675 491 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 NBPF7P0C2Y1 421 aaPredicted RBP5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 FPR3P25089 353 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 CPT1AP50416 773 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 INSCQ1MX18 579 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 FAM209BQ5JX69 171 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 DGKKQ5KSL6 1271 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 KIAA0408Q6ZU52 694 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 MRPL10Q7Z7H8 261 aaKnown RBP5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 IZUMO1Q8IYV9 350 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 SDR16C5Q8N3Y7 309 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 NANOGP1Q8N7R0 232 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 ZNF398Q8TD17 642 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 WASF1Q92558 559 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 DPCDQ9BVM2 203 aaPredicted RBP5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 TRMT13Q9NUP7 481 aaKnown RBP5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 SNX14Q9Y5W7 946 aa5.32□□□□□ -1.56
PRPF40A-205ENST00000467114 AGPSO00116 658 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 GABRB3P28472 473 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 PTDSS1P48651 473 aaKnown RBP5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 BCAT1P54687 386 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 E2F1Q01094 437 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 PMS2P11Q13670 270 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 RAPGEF1Q13905 1077 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 SLC29A2Q14542 456 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 TWIST1Q15672 202 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 FAM187BQ17R55 369 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 LY6KQ17RY6 165 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 SLC35G1Q2M3R5 365 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 IZUMO3Q5VZ72 239 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 SERPINA13PQ6UXR4 307 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 BCDIN3DQ7Z5W3 292 aaKnown RBP5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 LIX1LQ8IVB5 337 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 SFTPA1Q8IWL2 248 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 SAMD14Q8IZD0 417 aaPredicted RBP5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 SAMD3Q8N6K7 520 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 C16orf52Q8NHV5 167 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 DEPTORQ8TB45 409 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 ADAMTS18Q8TE60 1221 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 PPP2R3CQ969Q6 453 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 CTHRC1Q96CG8 243 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 CCDC138Q96M89 665 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 FYTTD1Q96QD9 318 aaKnown RBP5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 PRR25Q96S07 402 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 MYD88Q99836 296 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 FAM83DQ9H4H8 585 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 GBA2Q9HCG7 927 aaPredicted RBP5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 ASIC5Q9NY37 505 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 TFCP2L1Q9NZI6 479 aa5.31□□□□□ -1.56
PRPF40A-205ENST00000467114 BTBD19C9JJ37 291 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 AP4M1O00189 453 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 APOL1O14791 398 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 CCKBRP32239 447 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 RHBDL3P58872 404 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 KRT17Q04695 432 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 MANEALQ5VSG8 457 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 XRRA1Q6P2D8 792 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 SRLQ86TD4 932 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 YAF2Q8IY57 180 aa5.3□□□□□ -1.56
PRPF40A-205ENST00000467114 NRACQ8N912 160 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms