RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 NOVA1P51513 510 aaKnown RBP24.06■■□□□ 1.44
USP42-205ENST00000465073 IRX4P78413 519 aa24.06■■□□□ 1.44
USP42-205ENST00000465073 MAP7D1Q3KQU3 841 aa24.06■■□□□ 1.44
USP42-205ENST00000465073 C1orf220Q5T0J3 134 aa24.06■■□□□ 1.44
USP42-205ENST00000465073 SPOPLQ6IQ16 392 aa24.06■■□□□ 1.44
USP42-205ENST00000465073 PGBD3Q8N328 593 aa24.06■■□□□ 1.44
USP42-205ENST00000465073 ZNF513Q8N8E2 541 aaPredicted RBP24.06■■□□□ 1.44
USP42-205ENST00000465073 TERB1Q8NA31 727 aa24.06■■□□□ 1.44
USP42-205ENST00000465073 HNRNPABQ99729 332 aaKnown RBP24.06■■□□□ 1.44
USP42-205ENST00000465073 KLF16Q9BXK1 252 aaPredicted RBP24.06■■□□□ 1.44
USP42-205ENST00000465073 ZDHHC4Q9NPG8 344 aa24.06■■□□□ 1.44
USP42-205ENST00000465073 CYLDQ9NQC7 956 aa24.06■■□□□ 1.44
USP42-205ENST00000465073 SCML2Q9UQR0 700 aa24.06■■□□□ 1.44
USP42-205ENST00000465073 TRAF3IP3Q9Y228 551 aa24.06■■□□□ 1.44
USP42-205ENST00000465073 NUP205Q92621 2012 aa24.05■■□□□ 1.44
USP42-205ENST00000465073 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.05■■□□□ 1.44
USP42-205ENST00000465073 A0A1B0GVL5 298 aa24.05■■□□□ 1.44
USP42-205ENST00000465073 CDX4O14627 284 aaPredicted RBP24.05■■□□□ 1.44
USP42-205ENST00000465073 ATP5C1P36542 298 aaKnown RBP24.05■■□□□ 1.44
USP42-205ENST00000465073 DPP6P42658 865 aa24.05■■□□□ 1.44
USP42-205ENST00000465073 VAMP7P51809 220 aa24.05■■□□□ 1.44
USP42-205ENST00000465073 GOLGA8FQ08AF8 430 aa24.05■■□□□ 1.44
USP42-205ENST00000465073 GOLGA8DPQ0D2H9 430 aa24.05■■□□□ 1.44
USP42-205ENST00000465073 C10orf76Q5T2E6 689 aa24.05■■□□□ 1.44
USP42-205ENST00000465073 TMEFF1Q8IYR6 380 aa24.05■■□□□ 1.44
USP42-205ENST00000465073 IMPG2Q9BZV3 1241 aa24.05■■□□□ 1.44
USP42-205ENST00000465073 CYP3A43Q9HB55 503 aa24.05■■□□□ 1.44
USP42-205ENST00000465073 MBD1Q9UIS9 605 aaPredicted RBP24.05■■□□□ 1.44
USP42-205ENST00000465073 STARD13Q9Y3M8 1113 aa24.05■■□□□ 1.44
USP42-205ENST00000465073 GREM1O60565 184 aa24.04■■□□□ 1.44
USP42-205ENST00000465073 TBX18O95935 607 aa24.04■■□□□ 1.44
USP42-205ENST00000465073 ADORA2BP29275 332 aa24.04■■□□□ 1.44
USP42-205ENST00000465073 INCA1Q0VD86 236 aa24.04■■□□□ 1.44
USP42-205ENST00000465073 LMAN2Q12907 356 aa24.04■■□□□ 1.44
USP42-205ENST00000465073 SYT12Q8IV01 421 aa24.04■■□□□ 1.44
USP42-205ENST00000465073 FRMD1Q8N878 549 aa24.04■■□□□ 1.44
USP42-205ENST00000465073 PNPLA8Q9NP80 782 aa24.04■■□□□ 1.44
USP42-205ENST00000465073 WDR35Q9P2L0 1181 aa24.04■■□□□ 1.44
USP42-205ENST00000465073 LSM7Q9UK45 103 aaKnown RBP24.04■■□□□ 1.44
USP42-205ENST00000465073 HPSEQ9Y251 543 aa24.04■■□□□ 1.44
USP42-205ENST00000465073 PCDHA5Q9Y5H7 936 aa24.04■■□□□ 1.44
USP42-205ENST00000465073 CEP295Q9C0D2 2601 aa24.04■■□□□ 1.44
USP42-205ENST00000465073 GRAMD4Q6IC98 578 aa24.03■■□□□ 1.44
USP42-205ENST00000465073 KLHDC10Q6PID8 442 aa24.03■■□□□ 1.44
USP42-205ENST00000465073 CLEC20AQ6ZU45 233 aa24.03■■□□□ 1.44
USP42-205ENST00000465073 CCDC47Q96A33 483 aaKnown RBP24.03■■□□□ 1.44
USP42-205ENST00000465073 CYFIP2Q96F07 1278 aa24.03■■□□□ 1.44
USP42-205ENST00000465073 XPO6Q96QU8 1125 aaKnown RBP24.03■■□□□ 1.44
USP42-205ENST00000465073 NT5C1AQ9BXI3 368 aa24.03■■□□□ 1.44
USP42-205ENST00000465073 NUSAP1Q9BXS6 441 aaKnown RBP24.03■■□□□ 1.44
USP42-205ENST00000465073 DNAI2Q9GZS0 605 aa24.03■■□□□ 1.44
USP42-205ENST00000465073 DNAJC17Q9NVM6 304 aaKnown RBP24.03■■□□□ 1.44
USP42-205ENST00000465073 USP24Q9UPU5 2620 aa24.03■■□□□ 1.44
USP42-205ENST00000465073 HHLA1C9JL84 531 aa24.02■■□□□ 1.44
USP42-205ENST00000465073 GIPC1O14908 333 aa24.02■■□□□ 1.44
USP42-205ENST00000465073 CACNG3O60359 315 aa24.02■■□□□ 1.44
USP42-205ENST00000465073 CSRP1P21291 193 aaKnown RBP24.02■■□□□ 1.44
USP42-205ENST00000465073 NTSR1P30989 418 aa24.02■■□□□ 1.44
USP42-205ENST00000465073 PTGER3P43115 390 aa24.02■■□□□ 1.44
USP42-205ENST00000465073 NFIL3Q16649 462 aa24.02■■□□□ 1.44
USP42-205ENST00000465073 TRIM61Q5EBN2 209 aa24.02■■□□□ 1.44
USP42-205ENST00000465073 SH3PXD2AQ5TCZ1 1133 aa24.02■■□□□ 1.44
USP42-205ENST00000465073 INTS8Q75QN2 995 aaKnown RBP24.02■■□□□ 1.44
USP42-205ENST00000465073 GPRIN1Q7Z2K8 1008 aa24.02■■□□□ 1.44
USP42-205ENST00000465073 BBS2Q9BXC9 721 aa24.02■■□□□ 1.44
USP42-205ENST00000465073 OSER1Q9NX31 292 aa24.02■■□□□ 1.44
USP42-205ENST00000465073 MARK1Q9P0L2 795 aa24.02■■□□□ 1.44
USP42-205ENST00000465073 TRIM24O15164 1050 aa24.01■■□□□ 1.43
USP42-205ENST00000465073 ZBTB24O43167 697 aaPredicted RBP24.01■■□□□ 1.43
USP42-205ENST00000465073 CYP26A1O43174 497 aa24.01■■□□□ 1.43
USP42-205ENST00000465073 CEACAM1P13688 526 aa24.01■■□□□ 1.43
USP42-205ENST00000465073 HOXB2P14652 356 aa24.01■■□□□ 1.43
USP42-205ENST00000465073 ACO1P21399 889 aaKnown RBP24.01■■□□□ 1.43
USP42-205ENST00000465073 ENPEPQ07075 957 aa24.01■■□□□ 1.43
USP42-205ENST00000465073 LYSMD4Q5XG99 296 aa24.01■■□□□ 1.43
USP42-205ENST00000465073 SDE2Q6IQ49 451 aa24.01■■□□□ 1.43
USP42-205ENST00000465073 ARMCX6Q7L4S7 300 aa24.01■■□□□ 1.43
USP42-205ENST00000465073 TWNKQ96RR1 684 aa24.01■■□□□ 1.43
USP42-205ENST00000465073 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.01■■□□□ 1.433e-8■■■■■ 95.2
USP42-205ENST00000465073 DNMT3LQ9UJW3 386 aa24.01■■□□□ 1.43
USP42-205ENST00000465073 HCN2Q9UL51 889 aa24.01■■□□□ 1.43
USP42-205ENST00000465073 NEDD8-MDP1E9PL57 170 aa24■■□□□ 1.43
USP42-205ENST00000465073 AP5Z1O43299 807 aa24■■□□□ 1.43
USP42-205ENST00000465073 RHOBTB3O94955 611 aa24■■□□□ 1.43
USP42-205ENST00000465073 TYRP14679 529 aa24■■□□□ 1.43
USP42-205ENST00000465073 GABRG2P18507 467 aa24■■□□□ 1.43
USP42-205ENST00000465073 NR2F2P24468 414 aa24■■□□□ 1.43
USP42-205ENST00000465073 HOXD12P35452 270 aa24■■□□□ 1.43
USP42-205ENST00000465073 SYKP43405 635 aa24■■□□□ 1.43
USP42-205ENST00000465073 PLA2G4AP47712 749 aa24■■□□□ 1.43
USP42-205ENST00000465073 SLC36A4Q6YBV0 504 aa24■■□□□ 1.43
USP42-205ENST00000465073 SPRYD3Q8NCJ5 442 aa24■■□□□ 1.43
USP42-205ENST00000465073 JAKMIP2Q96AA8 810 aa24■■□□□ 1.43
USP42-205ENST00000465073 SPATA32Q96LK8 384 aa24■■□□□ 1.43
USP42-205ENST00000465073 APOBEC3GQ9HC16 384 aaKnown RBP24■■□□□ 1.43
USP42-205ENST00000465073 TMEM74BQ9NUR3 256 aa24■■□□□ 1.43
USP42-205ENST00000465073 PILRBQ9UKJ0 227 aa24■■□□□ 1.43
USP42-205ENST00000465073 MYO18AQ92614 2054 aaKnown RBP24■■□□□ 1.43
USP42-205ENST00000465073 RARGP13631 454 aa24■■□□□ 1.43
USP42-205ENST00000465073 KRT13P13646 458 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms