RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 DPH6Q7L8W6 267 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 CAND1Q86VP6 1230 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 ST13P4Q8IZP2 240 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 UBR7Q8N806 425 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 DEFB129Q9H1M3 183 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 PREBQ9HCU5 417 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 PIH1D1Q9NWS0 290 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 APOC4-APOC2K7ER74 178 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 KCNN4O15554 427 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 GRAP2O75791 330 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 RGS20O76081 388 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 ASS1P00966 412 aaKnown RBP13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 APOC2P02655 101 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 BPGMP07738 259 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 SERPINA6P08185 405 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 SERPINB6P35237 376 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 ROR1Q01973 937 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 TTLL12Q14166 644 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 MMEL1Q495T6 779 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 ACAD11Q709F0 780 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 MCF2L2Q86YR7 1114 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 NIPA2Q8N8Q9 360 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 TTC13Q8NBP0 860 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 PPP1R14CQ8TAE6 165 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 ZNF668Q96K58 619 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 GCNAQ96QF7 691 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 C17orf75Q9HAS0 396 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 PNPOQ9NVS9 261 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 GPATCH2LQ9NWQ4 482 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 SNNO75324 88 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 KRT7P08729 469 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 OSTNP61366 133 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 MAP3K10Q02779 954 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 TUBB3Q13509 450 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 EMC2Q15006 297 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 HADHQ16836 314 aaKnown RBP13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 CDO1Q16878 200 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 ANGEL2Q5VTE6 544 aaKnown RBP13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 PAOXQ6QHF9 649 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 SPATA24Q86W54 205 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 MCPH1Q8NEM0 835 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 TCHPQ9BT92 498 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 POPDC2Q9HBU9 364 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 XAB2Q9HCS7 855 aaKnown RBP13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 ZNF70Q9UC06 446 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 TBC1D30Q9Y2I9 924 aa13.06□□□□□ -0.32
CLCNKA-204ENST00000464764 CAPN8A6NHC0 703 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 IL1BP01584 269 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 ERBB2P04626 1255 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 UQCRBP14927 111 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 VAV1P15498 845 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 RBL1P28749 1068 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 MSX2P35548 267 aaPredicted RBP13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 CDH6P55285 790 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 FASTKD1Q53R41 847 aaKnown RBP13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 MAVSQ7Z434 540 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 SESTD1Q86VW0 696 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 CDR2LQ86X02 465 aaPredicted RBP13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 SEPT12Q8IYM1 358 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 DEPTORQ8TB45 409 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 MPP4Q96JB8 637 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 HAPLN3Q96S86 360 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 VCX3BQ9H321 246 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 VCX3AQ9NNX9 186 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 USP18Q9UMW8 372 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 NRXN2Q9P2S2 1712 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 GSRP00390 522 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 F7P08709 466 aaPredicted RBP13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 RAG1P15918 1043 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 ADORA2AP29274 412 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 ARRB2P32121 409 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 SCNN1BP51168 640 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 TFAMQ00059 246 aaKnown RBP13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 HNRNPDQ14103 355 aaKnown RBP13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 GK3PQ14409 553 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 PDK3Q15120 406 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 C15orf59Q2T9L4 293 aaPredicted RBP13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 GRAMD1BQ3KR37 738 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 PABPC1LQ4VXU2 614 aaKnown RBP13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 UNC5AQ6ZN44 842 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 ARHGAP18Q8N392 663 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 STKLD1Q8NE28 680 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 KLHL4Q9C0H6 718 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 USP29Q9HBJ7 922 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 GPAMQ9HCL2 828 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 TMOD2Q9NZR1 351 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 SYNPO2Q9UMS6 1093 aa13.05□□□□□ -0.32
CLCNKA-204ENST00000464764 RAD17O75943 681 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 NR3C2P08235 984 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 TGFB2P61812 414 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 CRADDP78560 199 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 RABGAP1LQ5R372 815 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 KYAT3Q6YP21 454 aaKnown RBP13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 THNSL1Q8IYQ7 743 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 DEFB107AQ8IZN7 70 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 PHTF2Q8N3S3 785 aa13.04□□□□□ -0.32
CLCNKA-204ENST00000464764 ATP6V0A1Q93050 837 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms