RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 VPS37CA5D8V6 355 aaPredicted RBP14.29□□□□□ -0.12
C9orf3-211ENST00000463372 PRRT4C9JH25 899 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 CYB561D2O14569 222 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 SGSM2O43147 1006 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 EFSO43281 561 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 CYP11B2P19099 503 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 PROZP22891 400 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 CHMLP26374 656 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 EPHA8P29322 1005 aaPredicted RBP14.29□□□□□ -0.12
C9orf3-211ENST00000463372 BCAT1P54687 386 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 PPP2R3AQ06190 1150 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 SHBQ15464 509 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 CDCP2Q5VXM1 449 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 ATCAYQ86WG3 371 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 CHD1LQ86WJ1 897 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 XPO6Q96QU8 1125 aaKnown RBP14.29□□□□□ -0.12
C9orf3-211ENST00000463372 NAP1L4Q99733 375 aaKnown RBP14.29□□□□□ -0.12
C9orf3-211ENST00000463372 RNF38Q9H0F5 515 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 ABCB6Q9NP58 842 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 SPHK2Q9NRA0 654 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 PCDHA12Q9UN75 941 aa14.29□□□□□ -0.12
C9orf3-211ENST00000463372 SPENQ96T58 3664 aaKnown RBP14.28□□□□□ -0.12
C9orf3-211ENST00000463372 CCDC169A6NNP5 214 aa14.28□□□□□ -0.12
C9orf3-211ENST00000463372 M0R2N6 131 aa14.28□□□□□ -0.12
C9orf3-211ENST00000463372 ACSL1P33121 698 aa14.28□□□□□ -0.12
C9orf3-211ENST00000463372 RACK1P63244 317 aaKnown RBP14.28□□□□□ -0.12
C9orf3-211ENST00000463372 DAB2P98082 770 aa14.28□□□□□ -0.12
C9orf3-211ENST00000463372 HDAC1Q13547 482 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-211ENST00000463372 TBR1Q16650 682 aa14.28□□□□□ -0.12
C9orf3-211ENST00000463372 KANSL1Q7Z3B3 1105 aa14.28□□□□□ -0.12
C9orf3-211ENST00000463372 SCN4BQ8IWT1 228 aa14.28□□□□□ -0.12
C9orf3-211ENST00000463372 HPS3Q969F9 1004 aa14.28□□□□□ -0.12
C9orf3-211ENST00000463372 PYM1Q9BRP8 204 aaKnown RBP14.28□□□□□ -0.12
C9orf3-211ENST00000463372 GDF3Q9NR23 364 aa14.28□□□□□ -0.12
C9orf3-211ENST00000463372 ANAPC2Q9UJX6 822 aa14.28□□□□□ -0.12
C9orf3-211ENST00000463372 PLAAQ9Y263 795 aa14.28□□□□□ -0.12
C9orf3-211ENST00000463372 DOCK9Q9BZ29 2069 aa14.27□□□□□ -0.12
C9orf3-211ENST00000463372 ARHGEF35A5YM69 484 aa14.27□□□□□ -0.13
C9orf3-211ENST00000463372 ABLIM1O14639 778 aa14.27□□□□□ -0.13
C9orf3-211ENST00000463372 CYP26A1O43174 497 aa14.27□□□□□ -0.13
C9orf3-211ENST00000463372 TSPAN3O60637 253 aa14.27□□□□□ -0.13
C9orf3-211ENST00000463372 SEMA4FO95754 770 aa14.27□□□□□ -0.13
C9orf3-211ENST00000463372 ABL1P00519 1130 aa14.27□□□□□ -0.13
C9orf3-211ENST00000463372 MBL2P11226 248 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-211ENST00000463372 DUSP3P51452 185 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-211ENST00000463372 MYL7Q01449 175 aa14.27□□□□□ -0.13
C9orf3-211ENST00000463372 WSCD1Q658N2 575 aa14.27□□□□□ -0.13
C9orf3-211ENST00000463372 TMEM25Q86YD3 366 aa14.27□□□□□ -0.13
C9orf3-211ENST00000463372 ARL14Q8N4G2 192 aa14.27□□□□□ -0.13
C9orf3-211ENST00000463372 LEO1Q8WVC0 666 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-211ENST00000463372 KIFAP3Q92845 792 aa14.27□□□□□ -0.13
C9orf3-211ENST00000463372 MOCOSQ96EN8 888 aa14.27□□□□□ -0.13
C9orf3-211ENST00000463372 ZBTB45Q96K62 511 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-211ENST00000463372 POLD4Q9HCU8 107 aa14.27□□□□□ -0.13
C9orf3-211ENST00000463372 MTORP42345 2549 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 PDZD2O15018 2839 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 A0A1B0GTL3 188 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 TTC26A0AVF1 554 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 A1L4Q6 167 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 OPA1O60313 960 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 GRNP28799 593 aaKnown RBP14.26□□□□□ -0.13
C9orf3-211ENST00000463372 DCTP40126 519 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.133e-6■□□□□ 11.2
C9orf3-211ENST00000463372 OXCT1P55809 520 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 BNIP3Q12983 259 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 PROX2Q3B8N5 592 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 SFMBT2Q5VUG0 894 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 CREB3L3Q68CJ9 461 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 SSC4DQ8WTU2 575 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 ABCG4Q9H172 646 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 ADNPQ9H2P0 1102 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 TMEM134Q9H6X4 195 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 SH3BP1Q9Y3L3 701 aa14.26□□□□□ -0.13
C9orf3-211ENST00000463372 TDRD6O60522 2096 aaKnown RBP14.26□□□□□ -0.13
C9orf3-211ENST00000463372 CDRT15L2A8MXV6 281 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 NEDD8-MDP1E9PL57 170 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 NPC1O15118 1278 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 OLFM2O95897 454 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 CLTAP09496 248 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 PPP3CCP48454 512 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 EXOSC10Q01780 885 aaKnown RBP14.25□□□□□ -0.13
C9orf3-211ENST00000463372 HS1BP3Q53T59 392 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 FHL5Q5TD97 284 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 SPATA1Q5VX52 437 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 C9orf57Q5W0N0 161 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 GALNT17Q6IS24 598 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 FOXR1Q6PIV2 292 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 ZC3H18Q86VM9 953 aaKnown RBP14.25□□□□□ -0.13
C9orf3-211ENST00000463372 ZSCAN1Q8NBB4 408 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 TSPAN18Q96SJ8 248 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 TRIM9Q9C026 710 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 BTBD1Q9H0C5 482 aa14.25□□□□□ -0.13
C9orf3-211ENST00000463372 MYH11P35749 1972 aa14.24□□□□□ -0.13
C9orf3-211ENST00000463372 ZNF840PA6NDX5 716 aa14.24□□□□□ -0.13
C9orf3-211ENST00000463372 LACTBL1A8MY62 500 aa14.24□□□□□ -0.13
C9orf3-211ENST00000463372 CACNG3O60359 315 aa14.24□□□□□ -0.13
C9orf3-211ENST00000463372 TOM1L1O75674 476 aa14.24□□□□□ -0.13
C9orf3-211ENST00000463372 DGKGP49619 791 aa14.24□□□□□ -0.13
C9orf3-211ENST00000463372 PDIA5Q14554 519 aa14.24□□□□□ -0.13
C9orf3-211ENST00000463372 SPATA2LQ8IUW3 424 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms