RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 HOXD12P35452 270 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 PSMD6Q15008 389 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 E2F4Q16254 413 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 SNX30Q5VWJ9 437 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 SCARA5Q6ZMJ2 495 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 GPRIN1Q7Z2K8 1008 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 DDX42Q86XP3 938 aaKnown RBP eCLIP16.62■□□□□ 0.25
SND1-203ENST00000463020 NELFCDQ8IXH7 590 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 HDDC3Q8N4P3 179 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 IPO4Q8TEX9 1081 aaKnown RBP16.62■□□□□ 0.25
SND1-203ENST00000463020 GBP4Q96PP9 640 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 SMOQ99835 787 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 DNAJC17Q9NVM6 304 aaKnown RBP16.62■□□□□ 0.25
SND1-203ENST00000463020 DNAAF2Q9NVR5 837 aaKnown RBP16.62■□□□□ 0.25
SND1-203ENST00000463020 CACNA2D2Q9NY47 1150 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 EHD2Q9NZN4 543 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 SH3BP1Q9Y3L3 701 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 R3HCC1Q9Y3T6 440 aaKnown RBP16.62■□□□□ 0.25
SND1-203ENST00000463020 GPSM3Q9Y4H4 160 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 PLXNB3Q9ULL4 1909 aa16.61■□□□□ 0.25
SND1-203ENST00000463020 FAM92AA1XBS5 289 aa16.61■□□□□ 0.25
SND1-203ENST00000463020 NEDD8-MDP1E9PL57 170 aa16.61■□□□□ 0.25
SND1-203ENST00000463020 CCDC130P13994 396 aa16.61■□□□□ 0.25
SND1-203ENST00000463020 TNNI1P19237 187 aa16.61■□□□□ 0.25
SND1-203ENST00000463020 ATXN3P54252 364 aaPredicted RBP16.61■□□□□ 0.25
SND1-203ENST00000463020 TNNC1P63316 161 aa16.61■□□□□ 0.25
SND1-203ENST00000463020 SCAPQ12770 1279 aa16.61■□□□□ 0.25
SND1-203ENST00000463020 CCDC73Q6ZRK6 1079 aa16.61■□□□□ 0.25
SND1-203ENST00000463020 MARCH9Q86YJ5 346 aa16.61■□□□□ 0.25
SND1-203ENST00000463020 FUKQ8N0W3 1084 aa16.61■□□□□ 0.25
SND1-203ENST00000463020 CEP76Q8TAP6 659 aa16.61■□□□□ 0.25
SND1-203ENST00000463020 OVCA2Q8WZ82 227 aa16.61■□□□□ 0.25
SND1-203ENST00000463020 KLF16Q9BXK1 252 aaPredicted RBP16.61■□□□□ 0.25
SND1-203ENST00000463020 IL21RQ9HBE5 538 aa16.61■□□□□ 0.25
SND1-203ENST00000463020 STARD13Q9Y3M8 1113 aa16.61■□□□□ 0.25
SND1-203ENST00000463020 SETXQ7Z333 2677 aaKnown RBP16.61■□□□□ 0.25
SND1-203ENST00000463020 ADAMTS20P59510 1910 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 KIAA0391O15091 583 aaKnown RBP16.6■□□□□ 0.25
SND1-203ENST00000463020 MDM4O15151 490 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 RTN3O95197 1032 aaPredicted RBP16.6■□□□□ 0.25
SND1-203ENST00000463020 CISD3P0C7P0 127 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 FTH1P19P0C7X4 201 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 TXLNAP40222 546 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 BYSLQ13895 437 aaKnown RBP16.6■□□□□ 0.25
SND1-203ENST00000463020 SURF1Q15526 300 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 BTBD8Q5XKL5 378 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 GRAMD4Q6IC98 578 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 SLC36A4Q6YBV0 504 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 TPGS1Q6ZTW0 290 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 SLCO6A1Q86UG4 719 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 CCDC65Q8IXS2 484 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 PDZD8Q8NEN9 1154 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 ZNF507Q8TCN5 953 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 SCFD1Q8WVM8 642 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 BHMTQ93088 406 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 OTUB2Q96DC9 234 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 MRGPRX1Q96LB2 322 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 GABRG3Q99928 467 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 KRT82Q9NSB4 513 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 NUDT5Q9UKK9 219 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.6■□□□□ 0.25
SND1-203ENST00000463020 SLCO1B1Q9Y6L6 691 aa16.6■□□□□ 0.25
SND1-203ENST00000463020 CACNG3O60359 315 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 AP1G2O75843 785 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 VNN1O95497 513 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 STAU1O95793 577 aaKnown RBP16.59■□□□□ 0.25
SND1-203ENST00000463020 TYRP14679 529 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 TUBP50607 506 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 BNC1Q01954 994 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 GRIK2Q13002 908 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 CUL4AQ13619 759 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 SLC39A14Q15043 492 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 TRIP6Q15654 476 aaKnown RBP16.59■□□□□ 0.25
SND1-203ENST00000463020 PLEKHG6Q3KR16 790 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 SOWAHCQ53LP3 525 aaPredicted RBP16.59■□□□□ 0.25
SND1-203ENST00000463020 ACOT1Q86TX2 421 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 NAXDQ8IW45 347 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 CHPFQ8IZ52 775 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 ZNF419Q96HQ0 510 aaPredicted RBP16.59■□□□□ 0.25
SND1-203ENST00000463020 DUSP9Q99956 384 aaKnown RBP16.59■□□□□ 0.25
SND1-203ENST00000463020 MED10Q9BTT4 135 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 KBTBD4Q9NVX7 518 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 PLK2Q9NYY3 685 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 APC2O95996 2303 aa16.59■□□□□ 0.25
SND1-203ENST00000463020 KCNJ18B7U540 433 aa16.58■□□□□ 0.24
SND1-203ENST00000463020 EIF3DO15371 548 aaKnown RBP eCLIP16.58■□□□□ 0.24
SND1-203ENST00000463020 CYP26A1O43174 497 aa16.58■□□□□ 0.24
SND1-203ENST00000463020 TLR5O60602 858 aa16.58■□□□□ 0.24
SND1-203ENST00000463020 CBFA2T3O75081 653 aa16.58■□□□□ 0.24
SND1-203ENST00000463020 SYT1P21579 422 aa16.58■□□□□ 0.24
SND1-203ENST00000463020 DPP6P42658 865 aa16.58■□□□□ 0.24
SND1-203ENST00000463020 EHHADHQ08426 723 aa16.58■□□□□ 0.24
SND1-203ENST00000463020 COL28A1Q2UY09 1125 aa16.58■□□□□ 0.24
SND1-203ENST00000463020 HTR3DQ70Z44 454 aa16.58■□□□□ 0.24
SND1-203ENST00000463020 TRMT11Q7Z4G4 463 aaKnown RBP16.58■□□□□ 0.24
SND1-203ENST00000463020 MDM1Q8TC05 714 aa16.58■□□□□ 0.24
SND1-203ENST00000463020 KCNV2Q8TDN2 545 aa16.58■□□□□ 0.24
SND1-203ENST00000463020 BBC3Q96PG8 261 aaPredicted RBP16.58■□□□□ 0.24
SND1-203ENST00000463020 BBS2Q9BXC9 721 aa16.58■□□□□ 0.24
SND1-203ENST00000463020 NMUR1Q9HB89 426 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms