RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 BSNQ9UPA5 3926 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 CCDC163A0A0D9SF12 145 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 EIF4E1BA6NMX2 242 aaKnown RBP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 KLRF2D3W0D1 207 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 F8W810 466 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 NRP1O14786 923 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 ARHGAP6O43182 974 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 DHX16O60231 1041 aaKnown RBP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 HBP1O60381 514 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 RPP40O75818 363 aaKnown RBP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 CCNE2O96020 404 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 CPP00450 1065 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 HNRNPA1P09651 372 aaKnown RBP eCLIP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 MSL3P1P0C860 447 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 DARSP14868 501 aaKnown RBP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 ZSCAN20P17040 1043 aaPredicted RBP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 PAMP19021 973 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 FGFR4P22455 802 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 HOXA9P31269 272 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 HOXC12P31275 282 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 CLCN3P51790 818 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 NCKAP1LP55160 1127 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 MLLT6P55198 1093 aaPredicted RBP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 NLRP11P59045 1033 aaKnown RBP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 HAND2P61296 217 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 ITGB3BPQ13352 177 aaPredicted RBP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 HSP90AA2PQ14568 343 aaPredicted RBP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 SLC5A9Q2M3M2 681 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 MTERF2Q49AM1 385 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 ZNF484Q5JVG2 852 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 DAB2IPQ5VWQ8 1189 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 TANGO2Q6ICL3 276 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 USP17L6PQ6QN14 398 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 GLB1LQ6UWU2 654 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 PALB2Q86YC2 1186 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 CCDC60Q8IWA6 550 aaPredicted RBP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 ZNF843Q8N446 348 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 TP53I13Q8NBR0 393 aaPredicted RBP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 FAM3CQ92520 227 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 TNPO1Q92973 898 aaKnown RBP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 ELSPBP1Q96BH3 223 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 LRIG1Q96JA1 1093 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 PIGSQ96S52 555 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 RNF38Q9H0F5 515 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 OSBPL2Q9H1P3 480 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 TMEM9BQ9NQ34 198 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 RBM12Q9NTZ6 932 aaKnown RBP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 DACT1Q9NYF0 836 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 GDE1Q9NZC3 331 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 FNIP2Q9P278 1114 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 SLC9A2Q9UBY0 812 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 SSX2IPQ9Y2D8 614 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 PIAS3Q9Y6X2 628 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 KIF26AQ9ULI4 1882 aaPredicted RBP5.93□□□□□ -1.46
SPTA1-202ENST00000461624 NFASCO94856 1347 aa5.93□□□□□ -1.46
SPTA1-202ENST00000461624 NBASA2RRP1 2371 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 SPAARA0A1B0GVQ0 90 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 A0A1W2PQJ5 194 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 BCLAF3A2AJT9 711 aaKnown RBP5.92□□□□□ -1.46
SPTA1-202ENST00000461624 B4E1Z4 1266 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 J3QKU1 62 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 FFAR3O14843 346 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 HMMRO75330 724 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 RPL17P18621 184 aaKnown RBP5.92□□□□□ -1.46
SPTA1-202ENST00000461624 GPC3P51654 580 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 DSC1Q08554 894 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 SCRN1Q12765 414 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 SERINC3Q13530 473 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 MTMR1Q13613 665 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 PKN3Q6P5Z2 889 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 ABHD15Q6UXT9 468 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 MFSD6Q6ZSS7 791 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 FTSJ3Q8IY81 847 aaKnown RBP5.92□□□□□ -1.46
SPTA1-202ENST00000461624 COLGALT2Q8IYK4 626 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 CHCHD4Q8N4Q1 142 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 SYT8Q8NBV8 401 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 BTN2A2Q8WVV5 523 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 B3GALT6Q96L58 329 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 DEPDC7Q96QD5 511 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 SRPK1Q96SB4 655 aaKnown RBP5.92□□□□□ -1.46
SPTA1-202ENST00000461624 LRRCC1Q9C099 1032 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 KAT14Q9H8E8 782 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 ZNF334Q9HCZ1 680 aaPredicted RBP5.92□□□□□ -1.46
SPTA1-202ENST00000461624 JADE2Q9NQC1 790 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 KCNH7Q9NS40 1196 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 ZBTB40Q9NUA8 1239 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 HCFC1R1Q9NWW0 138 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 DKK4Q9UBT3 224 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 THADAQ6YHU6 1953 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 CELSR1Q9NYQ6 3014 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 KIAA1549LQ6ZVL6 1849 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 FBN3Q75N90 2809 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 OTOGQ6ZRI0 2925 aa5.92□□□□□ -1.46
SPTA1-202ENST00000461624 TDRD15B5MCY1 1934 aaKnown RBP5.91□□□□□ -1.46
SPTA1-202ENST00000461624 PTPRDP23468 1912 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 PCDH15Q96QU1 1955 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 A0A087WV48 116 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 NPHP3-ACAD11A0A0J9YXS1 232 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 CCL16O15467 120 aa5.91□□□□□ -1.46
SPTA1-202ENST00000461624 MAFGO15525 162 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms