RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 HAUS4Q9H6D7 363 aa23.57■■□□□ 1.36
C9orf3-209ENST00000460573 E5RJQ4 531 aa23.56■■□□□ 1.36
C9orf3-209ENST00000460573 DPYSL4O14531 572 aa23.56■■□□□ 1.36
C9orf3-209ENST00000460573 CKMP06732 381 aa23.56■■□□□ 1.36
C9orf3-209ENST00000460573 HNRNPH3P31942 346 aaKnown RBP23.56■■□□□ 1.36
C9orf3-209ENST00000460573 TSR1Q2NL82 804 aaKnown RBP23.56■■□□□ 1.36
C9orf3-209ENST00000460573 PARM1Q6UWI2 310 aa23.56■■□□□ 1.36
C9orf3-209ENST00000460573 ZDHHC17Q8IUH5 632 aa23.56■■□□□ 1.36
C9orf3-209ENST00000460573 GPIHBP1Q8IV16 184 aa23.56■■□□□ 1.36
C9orf3-209ENST00000460573 CNGA4Q8IV77 575 aa23.56■■□□□ 1.36
C9orf3-209ENST00000460573 SCUBE3Q8IX30 993 aa23.56■■□□□ 1.36
C9orf3-209ENST00000460573 CELF5Q8N6W0 485 aaKnown RBP23.56■■□□□ 1.36
C9orf3-209ENST00000460573 ARL14EPQ8N8R7 260 aaPredicted RBP23.56■■□□□ 1.36
C9orf3-209ENST00000460573 CYP2S1Q96SQ9 504 aa23.56■■□□□ 1.36
C9orf3-209ENST00000460573 SYNCQ9H7C4 482 aa23.56■■□□□ 1.36
C9orf3-209ENST00000460573 NMUR1Q9HB89 426 aa23.56■■□□□ 1.36
C9orf3-209ENST00000460573 ABCC13Q9NSE7 274 aa23.56■■□□□ 1.36
C9orf3-209ENST00000460573 TDP1Q9NUW8 608 aa23.56■■□□□ 1.36
C9orf3-209ENST00000460573 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.56■■□□□ 1.36
C9orf3-209ENST00000460573 TRIOO75962 3097 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 PIK3R2O00459 728 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 TLR5O60602 858 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 SERPING1P05155 500 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 UNGP13051 313 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-209ENST00000460573 RARGP13631 454 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 ATP5C1P36542 298 aaKnown RBP23.55■■□□□ 1.36
C9orf3-209ENST00000460573 GABRB2P47870 512 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 SLC7A9P82251 487 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 TBX2Q13207 712 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-209ENST00000460573 PTPN20Q4JDL3 420 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 BTBD8Q5XKL5 378 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 E4F1Q66K89 784 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-209ENST00000460573 BHLHA9Q7RTU4 235 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 FGF14Q92915 247 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 C18orf8Q96DM3 657 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 DNAJC7Q99615 494 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 SYT11Q9BT88 431 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 CCSER2Q9H7U1 834 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 OLA1Q9NTK5 396 aaKnown RBP23.55■■□□□ 1.36
C9orf3-209ENST00000460573 SEPT11Q9NVA2 429 aaKnown RBP23.55■■□□□ 1.36
C9orf3-209ENST00000460573 OSER1Q9NX31 292 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 ARHGAP26Q9UNA1 814 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 NUMBLQ9Y6R0 609 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 MYO16Q9Y6X6 1858 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 ANAPC1Q9H1A4 1944 aa23.55■■□□□ 1.36
C9orf3-209ENST00000460573 YJEFN3A6XGL0 299 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 E7ENQ6 273 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 PAPSS1O43252 624 aaPredicted RBP23.54■■□□□ 1.36
C9orf3-209ENST00000460573 COCHO43405 550 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 LTFP02788 710 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 TCF3P15923 654 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 FCARP24071 287 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 NSFP46459 744 aaKnown RBP23.54■■□□□ 1.36
C9orf3-209ENST00000460573 PGFP49763 221 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 CENPCQ03188 943 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 CLEC16AQ2KHT3 1053 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 EFHC1Q5JVL4 640 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 NAA35Q5VZE5 725 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 BSPRYQ5W0U4 402 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 ASTLQ6HA08 431 aaPredicted RBP23.54■■□□□ 1.36
C9orf3-209ENST00000460573 TANGO2Q6ICL3 276 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 BEND5Q7L4P6 421 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 VPS36Q86VN1 386 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 SIX5Q8N196 739 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 DEPDC1BQ8WUY9 529 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 RSAD2Q8WXG1 361 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 CPA5Q8WXQ8 436 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 USP13Q92995 863 aaPredicted RBP23.54■■□□□ 1.36
C9orf3-209ENST00000460573 SLC22A12Q96S37 553 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 PCDHB18PQ96TA0 734 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 NACA2Q9H009 215 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 RNF38Q9H0F5 515 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 ZNHIT6Q9NWK9 470 aaKnown RBP23.54■■□□□ 1.36
C9orf3-209ENST00000460573 ASNSD1Q9NWL6 643 aa23.54■■□□□ 1.36
C9orf3-209ENST00000460573 NUP210Q8TEM1 1887 aaPredicted RBP23.53■■□□□ 1.36
C9orf3-209ENST00000460573 AKR1B15C9JRZ8 316 aaPredicted RBP23.53■■□□□ 1.36
C9orf3-209ENST00000460573 MFAP3LO75121 409 aa23.53■■□□□ 1.36
C9orf3-209ENST00000460573 GLI1P08151 1106 aa23.53■■□□□ 1.36
C9orf3-209ENST00000460573 MBL2P11226 248 aaPredicted RBP23.53■■□□□ 1.36
C9orf3-209ENST00000460573 MRE11P49959 708 aa23.53■■□□□ 1.36
C9orf3-209ENST00000460573 TDRD12Q587J7 1177 aaKnown RBP23.53■■□□□ 1.36
C9orf3-209ENST00000460573 HGSNATQ68CP4 663 aa23.53■■□□□ 1.36
C9orf3-209ENST00000460573 TOGARAM2Q6ZUX3 1019 aa23.53■■□□□ 1.36
C9orf3-209ENST00000460573 ZNF571Q7Z3V5 609 aaPredicted RBP23.53■■□□□ 1.36
C9orf3-209ENST00000460573 DDX42Q86XP3 938 aaKnown RBP eCLIP23.53■■□□□ 1.36
C9orf3-209ENST00000460573 MFSD6LQ8IWD5 586 aa23.53■■□□□ 1.36
C9orf3-209ENST00000460573 SLC44A3Q8N4M1 653 aa23.53■■□□□ 1.36
C9orf3-209ENST00000460573 CLEC4CQ8WTT0 213 aa23.53■■□□□ 1.36
C9orf3-209ENST00000460573 NDRG1Q92597 394 aaKnown RBP23.53■■□□□ 1.36
C9orf3-209ENST00000460573 ATOH1Q92858 354 aaPredicted RBP23.53■■□□□ 1.36
C9orf3-209ENST00000460573 DNMT3LQ9UJW3 386 aa23.53■■□□□ 1.36
C9orf3-209ENST00000460573 HEPACAM2A8MVW5 462 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 NARSO43776 548 aaKnown RBP23.52■■□□□ 1.36
C9orf3-209ENST00000460573 PRAMEF12O95522 483 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 ERBB2P04626 1255 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 SKILP12757 684 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 PSMC3P17980 439 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 MMP8P22894 467 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 CDC25BP30305 580 aa23.52■■□□□ 1.36
C9orf3-209ENST00000460573 SCNN1AP37088 669 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms