RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 XPNPEP3Q9NQH7 507 aa14.71□□□□□ -0.05
ERCC3-205ENST00000460485 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.71□□□□□ -0.05
ERCC3-205ENST00000460485 KLHL11Q9NVR0 708 aa14.71□□□□□ -0.05
ERCC3-205ENST00000460485 SENP1Q9P0U3 644 aa14.71□□□□□ -0.05
ERCC3-205ENST00000460485 TJP2Q9UDY2 1190 aa14.71□□□□□ -0.05
ERCC3-205ENST00000460485 DSEQ9UL01 958 aa14.71□□□□□ -0.05
ERCC3-205ENST00000460485 STAP1Q9ULZ2 295 aa14.71□□□□□ -0.05
ERCC3-205ENST00000460485 NOVA2Q9UNW9 492 aaKnown RBP14.71□□□□□ -0.05
ERCC3-205ENST00000460485 HES2Q9Y543 173 aa14.71□□□□□ -0.05
ERCC3-205ENST00000460485 SF3B1O75533 1304 aaKnown RBP eCLIP14.7□□□□□ -0.06
ERCC3-205ENST00000460485 PTGESO14684 152 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 APOL1O14791 398 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 PAPSS1O43252 624 aaPredicted RBP14.7□□□□□ -0.06
ERCC3-205ENST00000460485 SPAG6O75602 509 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 ATP2A2P16615 1042 aaKnown RBP14.7□□□□□ -0.06
ERCC3-205ENST00000460485 NPR3P17342 541 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 ITGB8P26012 769 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 ARL4CP56559 192 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 EIF3EP60228 445 aaKnown RBP14.7□□□□□ -0.06
ERCC3-205ENST00000460485 MAGOHP61326 146 aaKnown RBP14.7□□□□□ -0.06
ERCC3-205ENST00000460485 GPS1Q13098 491 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 PTK7Q13308 1070 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 DPYSL3Q14195 570 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 DPYSL2Q16555 572 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 PTGISQ16647 500 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 CCDC14Q49A88 953 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 FAM26DQ5JW98 314 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 RNASEH2BQ5TBB1 312 aaKnown RBP14.7□□□□□ -0.06
ERCC3-205ENST00000460485 SLC9A4Q6AI14 798 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 ANKS1BQ7Z6G8 1248 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 CDKL3Q8IVW4 592 aaPredicted RBP14.7□□□□□ -0.06
ERCC3-205ENST00000460485 C12orf29Q8N999 325 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 KLHDC9Q8NEP7 349 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 FAM172AQ8WUF8 416 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 TIFAQ96CG3 184 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 RNF157Q96PX1 679 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 RBM15Q96T37 977 aaKnown RBP eCLIP14.7□□□□□ -0.06
ERCC3-205ENST00000460485 FERMT1Q9BQL6 677 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 DDX23Q9BUQ8 820 aaKnown RBP14.7□□□□□ -0.06
ERCC3-205ENST00000460485 CALN1Q9BXU9 219 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 TSPYL2Q9H2G4 693 aaPredicted RBP14.7□□□□□ -0.06
ERCC3-205ENST00000460485 FAM49BQ9NUQ9 324 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 NINJ2Q9NZG7 142 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 BCCIPQ9P287 314 aaKnown RBP eCLIP14.7□□□□□ -0.06
ERCC3-205ENST00000460485 ST3GAL5Q9UNP4 418 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 FARP1Q9Y4F1 1045 aaPredicted RBP14.7□□□□□ -0.06
ERCC3-205ENST00000460485 PTPRDP23468 1912 aa14.7□□□□□ -0.06
ERCC3-205ENST00000460485 EBAG9O00559 213 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 INPPL1O15357 1258 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 CLTBP09497 229 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 HPDP32754 393 aaPredicted RBP14.69□□□□□ -0.06
ERCC3-205ENST00000460485 MATKP42679 507 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 MAGEA4P43358 317 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 TLE2Q04725 743 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 GRIK3Q13003 919 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 SMTNL2Q2TAL5 461 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 DNAJC21Q5F1R6 531 aaKnown RBP14.69□□□□□ -0.06
ERCC3-205ENST00000460485 TXNRD3NBQ6F5E7 133 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 BCAS4Q8TDM0 211 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 HSPH1Q92598 858 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 SLC9A7Q96T83 725 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 CCDC134Q9H6E4 229 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 NGRNQ9NPE2 291 aaKnown RBP14.69□□□□□ -0.06
ERCC3-205ENST00000460485 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.69□□□□□ -0.06
ERCC3-205ENST00000460485 PAK5Q9P286 719 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 CDH9Q9ULB4 789 aa14.69□□□□□ -0.06
ERCC3-205ENST00000460485 COL4A4P53420 1690 aaPredicted RBP14.68□□□□□ -0.06
ERCC3-205ENST00000460485 BCLAF3A2AJT9 711 aaKnown RBP14.68□□□□□ -0.06
ERCC3-205ENST00000460485 HACD1B0YJ81 288 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 E7EVH7 732 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 NDUFAB1O14561 156 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 CYB561D2O14569 222 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 ALOX15BO15296 676 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 FAM107AO95990 144 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 FAM200BP0CF97 657 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 RBP3P10745 1247 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 ODC1P11926 461 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 RAG1P15918 1043 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 ATP1A2P50993 1020 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 ZNF200P98182 395 aaPredicted RBP14.68□□□□□ -0.06
ERCC3-205ENST00000460485 FPGSQ05932 587 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 AUHQ13825 339 aaKnown RBP14.68□□□□□ -0.06
ERCC3-205ENST00000460485 MAPRE1Q15691 268 aaKnown RBP14.68□□□□□ -0.06
ERCC3-205ENST00000460485 HIF1AQ16665 826 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 ERMARDQ5T6L9 678 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 GDF6Q6KF10 455 aaPredicted RBP14.68□□□□□ -0.06
ERCC3-205ENST00000460485 CXCL17Q6UXB2 119 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 CYP4V2Q6ZWL3 525 aaPredicted RBP14.68□□□□□ -0.06
ERCC3-205ENST00000460485 RNF180Q86T96 592 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 SCML4Q8N228 414 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 ATP11CQ8NB49 1132 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 SLC2A14Q8TDB8 520 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 PRCCQ92733 491 aaPredicted RBP14.68□□□□□ -0.06
ERCC3-205ENST00000460485 TSEN34Q9BSV6 310 aaKnown RBP14.68□□□□□ -0.06
ERCC3-205ENST00000460485 ADAM7Q9H2U9 754 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 PCDH18Q9HCL0 1135 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 PCSK1NQ9UHG2 260 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 SLC24A2Q9UI40 661 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 PHF24Q9UPV7 400 aa14.68□□□□□ -0.06
ERCC3-205ENST00000460485 RAD54BQ9Y620 910 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms