RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 EURLQ9NYK6 297 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 DYTNA2CJ06 578 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 AREL1O15033 823 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 OGTO15294 1046 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 TBC1D4O60343 1298 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 H2AFYO75367 372 aaKnown RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 SP100P23497 879 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 ADORA2AP29274 412 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 RAB27AP51159 221 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 KCNJ2P63252 427 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 IFRD2Q12894 506 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 ZNF268Q14587 947 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 RASA2Q15283 850 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 CNGA2Q16280 664 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 KBTBD12Q3ZCT8 623 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 CDR2LQ86X02 465 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 RBM12BQ8IXT5 1001 aaKnown RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 GDPD5Q8WTR4 605 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 TARS2Q9BW92 718 aaKnown RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 HEMGNQ9BXL5 484 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 CDC42EP4Q9H3Q1 356 aaKnown RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 ABHD16BQ9H3Z7 469 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 EBF2Q9HAK2 575 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 RSL24D1Q9UHA3 163 aaKnown RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 SORCS3Q9UPU3 1222 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 A0A087X0T9 212 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 BTNL10A8MVZ5 291 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 ASNA1O43681 348 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 PAEPP09466 180 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 FAM228BP0C875 321 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 THRAP10827 490 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 DYNLT1P63172 113 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 MCL1Q07820 350 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 CBX3Q13185 183 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 PTK7Q13308 1070 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 SGSM1Q2NKQ1 1148 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 ZNF667Q5HYK9 610 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 ATF7IP2Q5U623 682 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 IQSEC1Q6DN90 963 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 TRAF7Q6Q0C0 670 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 MOB2Q70IA6 237 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 THNSL1Q8IYQ7 743 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 GALNT4Q8N4A0 578 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 C7orf31Q8N865 590 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 OR9Q1Q8NGQ5 310 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 RFWD2Q8NHY2 731 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 USP33Q8TEY7 942 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 ABHD8Q96I13 439 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 TMEM237Q96Q45 408 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 CGRRF1Q99675 332 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 TMEM120AQ9BXJ8 343 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.41□□□□□ -1.38
VPS13D-202ENST00000460333 HBS1LQ9Y450 684 aaKnown RBP6.41□□□□□ -1.38
VPS13D-202ENST00000460333 DUSP10Q9Y6W6 482 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 TMEM150BA6NC51 233 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 SOWAHBA6NEL2 793 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 SLC15A5A6NIM6 579 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 CFAP99D6REC4 459 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 GOLGA8TH3BQL2 631 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 RBAK-RBAKDNI3L0D1 243 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 PMM2O15305 246 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 GZMAP12544 262 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 ALADP13716 330 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 VAV1P15498 845 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 MAGEA8P43361 318 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 ACOT2P49753 483 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 C4orf22Q6V702 233 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 C9orf72Q96LT7 481 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 C1orf50Q9BV19 199 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 TMEM117Q9H0C3 514 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 EPS8L2Q9H6S3 715 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 WRAP73Q9P2S5 460 aaPredicted RBP6.41□□□□□ -1.38
VPS13D-202ENST00000460333 DAPK2Q9UIK4 370 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 GRID1Q9ULK0 1009 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 PCDHB2Q9Y5E7 798 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 ALG6Q9Y672 507 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 PSME4Q14997 1843 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 C5orf60A6NFR6 353 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 RNF225M0QZC1 329 aaPredicted RBP6.41□□□□□ -1.38
VPS13D-202ENST00000460333 PRPSAP2O60256 369 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 SRP72O76094 671 aaKnown RBP6.41□□□□□ -1.38
VPS13D-202ENST00000460333 HLA-DRAP01903 254 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 ALOX5P09917 674 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 CYP2C8P10632 490 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 IL1RL1Q01638 556 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 LAMTOR4Q0VGL1 99 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 KIF19Q2TAC6 998 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 ZNF699Q32M78 642 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 GJC2Q5T442 439 aaPredicted RBP6.41□□□□□ -1.38
VPS13D-202ENST00000460333 MTHFD1LQ6UB35 978 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 TMC5Q6UXY8 1006 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 ZNF571Q7Z3V5 609 aaPredicted RBP6.41□□□□□ -1.38
VPS13D-202ENST00000460333 CDKL3Q8IVW4 592 aaPredicted RBP6.41□□□□□ -1.38
VPS13D-202ENST00000460333 COQ7Q99807 217 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 ECSITQ9BQ95 431 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 CNPY3Q9BT09 278 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 CCDC90BQ9GZT6 254 aa6.41□□□□□ -1.38
VPS13D-202ENST00000460333 TOPORSQ9NS56 1045 aaPredicted RBP6.41□□□□□ -1.38
VPS13D-202ENST00000460333 COPG2Q9UBF2 871 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms