RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 GMEB2Q9UKD1 530 aa13.04□□□□□ -0.32
VEGFA-210ENST00000457104 NUDT5Q9UKK9 219 aa13.04□□□□□ -0.32
VEGFA-210ENST00000457104 CIZ1Q9ULV3 898 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-210ENST00000457104 SH3BP1Q9Y3L3 701 aa13.04□□□□□ -0.32
VEGFA-210ENST00000457104 TULP2O00295 520 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 BIN1O00499 593 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 MDM4O15151 490 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 PMM2O15305 246 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 HOXC11O43248 304 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-210ENST00000457104 RPP40O75818 363 aaKnown RBP13.03□□□□□ -0.32
VEGFA-210ENST00000457104 KAT7O95251 611 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 RARGP13631 454 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 PPP1R2P41236 205 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 KIR2DL1P43626 348 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-210ENST00000457104 SEC13P55735 322 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 GAD2Q05329 585 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 STIM1Q13586 685 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 EMC10Q5UCC4 262 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 KLHL10Q6JEL2 608 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 PIGZQ86VD9 579 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 ANKRD52Q8NB46 1076 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 LMO3Q8TAP4 145 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 NELFBQ8WX92 580 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 ACDQ96AP0 544 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 NACA2Q9H009 215 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 METTL14Q9HCE5 456 aaKnown RBP13.03□□□□□ -0.32
VEGFA-210ENST00000457104 SPHK2Q9NRA0 654 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 CLIC5Q9NZA1 410 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 EBF1Q9UH73 591 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 DNMT3LQ9UJW3 386 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 NAGPAQ9UK23 515 aa13.03□□□□□ -0.32
VEGFA-210ENST00000457104 TNRC6BQ9UPQ9 1833 aaKnown RBP13.02□□□□□ -0.32
VEGFA-210ENST00000457104 AXIN1O15169 862 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 LRP3O75074 770 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 TULP3O75386 442 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 APBB3O95704 486 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 HNRNPLP14866 589 aaKnown RBP eCLIP13.02□□□□□ -0.33
VEGFA-210ENST00000457104 PSEN1P49768 467 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 MRPS21P82921 87 aaKnown RBP13.02□□□□□ -0.33
VEGFA-210ENST00000457104 KDSRQ06136 332 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 LRMPQ12912 555 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 RSPO4Q2I0M5 234 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-210ENST00000457104 C10orf120Q5SQS8 335 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 Q6ZNB5 142 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 CEP68Q76N32 757 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 BHLHA9Q7RTU4 235 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-210ENST00000457104 KBTBD6Q86V97 674 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 CCDC33Q8N5R6 958 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 ALLCQ8N6M5 410 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 NAT16Q8N8M0 369 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 IL17RCQ8NAC3 791 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 CCDC26Q8TAB7 109 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 ZC3H10Q96K80 434 aaKnown RBP13.02□□□□□ -0.33
VEGFA-210ENST00000457104 ARHGEF4Q9NR80 690 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 HCN2Q9UL51 889 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 MMP17Q9ULZ9 603 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 CTNND2Q9UQB3 1225 aa13.02□□□□□ -0.33
VEGFA-210ENST00000457104 RNF225M0QZC1 329 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-210ENST00000457104 TRIM24O15164 1050 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 STC2O76061 302 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 KLKB1P03952 638 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 APODP05090 189 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 GRIA2P42262 883 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 TNFRSF4P43489 277 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 PLA2G4AP47712 749 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 PDE4CQ08493 712 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 PUM1Q14671 1186 aaKnown RBP eCLIP13.01□□□□□ -0.334e-7■■■□□ 16.2
VEGFA-210ENST00000457104 CRY1Q16526 586 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 GOLGA7BQ2TAP0 167 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 ANO4Q32M45 955 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 CCDC40Q4G0X9 1142 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 SGO2Q562F6 1265 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 PM20D1Q6GTS8 502 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 ERMP1Q7Z2K6 904 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 CACNA2D4Q7Z3S7 1137 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 RASSF3Q86WH2 238 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 TRIM59Q8IWR1 403 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 TFAP2BQ92481 460 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 P2RY11Q96G91 374 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 SEMA4GQ9NTN9 838 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 TSPAN16Q9UKR8 245 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 USP18Q9UMW8 372 aa13.01□□□□□ -0.33
VEGFA-210ENST00000457104 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.01□□□□□ -0.33
VEGFA-210ENST00000457104 BICDL2A1A5D9 508 aa13□□□□□ -0.33
VEGFA-210ENST00000457104 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13□□□□□ -0.33
VEGFA-210ENST00000457104 SGK1O00141 431 aa13□□□□□ -0.33
VEGFA-210ENST00000457104 O00370 1275 aa13□□□□□ -0.33
VEGFA-210ENST00000457104 XPO1O14980 1071 aaKnown RBP13□□□□□ -0.33
VEGFA-210ENST00000457104 DCLK1O15075 740 aa13□□□□□ -0.33
VEGFA-210ENST00000457104 ADAM23O75077 832 aa13□□□□□ -0.33
VEGFA-210ENST00000457104 GABBR2O75899 941 aa13□□□□□ -0.33
VEGFA-210ENST00000457104 KLF8O95600 359 aaPredicted RBP13□□□□□ -0.33
VEGFA-210ENST00000457104 VDRP11473 427 aa13□□□□□ -0.33
VEGFA-210ENST00000457104 TBXAS1P24557 533 aaPredicted RBP13□□□□□ -0.33
VEGFA-210ENST00000457104 TIE1P35590 1138 aa13□□□□□ -0.33
VEGFA-210ENST00000457104 TKTL1P51854 596 aa13□□□□□ -0.33
VEGFA-210ENST00000457104 BCAT1P54687 386 aa13□□□□□ -0.33
VEGFA-210ENST00000457104 MARSP56192 900 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms