RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 FOXD4L3Q6VB84 417 aaPredicted RBP5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 PRR23BQ6ZRT6 265 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 Q6ZS52 159 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 DGLUCYQ7Z3D6 616 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 TMEM150AQ86TG1 271 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 ITIH5Q86UX2 942 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 OSTM1Q86WC4 334 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 PDCL2Q8N4E4 241 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 PHC3Q8NDX5 983 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 GRIN3AQ8TCU5 1115 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 BPIFB1Q8TDL5 484 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 DEPDC1BQ8WUY9 529 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 NELL1Q92832 810 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 ACCSQ96QU6 501 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 TSPAN18Q96SJ8 248 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 CYP2S1Q96SQ9 504 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 CBWD1Q9BRT8 395 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 ST6GALNAC4Q9H4F1 302 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 EBF3Q9H4W6 596 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 TASP1Q9H6P5 420 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 FBRSL1Q9HCM7 1045 aaKnown RBP5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 TRPV5Q9NQA5 729 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 DDX43Q9NXZ2 648 aaKnown RBP5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 ADAMTS1Q9UHI8 967 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 GTF3C4Q9UKN8 822 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 MTMR6Q9Y217 621 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 CCL26Q9Y258 94 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 DERAQ9Y315 318 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 C2CD2Q9Y426 696 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 ASB3Q9Y575 518 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 PCDHB5Q9Y5E4 795 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 PCDHGA2Q9Y5H1 932 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 NUP205Q92621 2012 aa5.04□□□□□ -1.6
GTF3C3-208ENST00000455546 PTPRDP23468 1912 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 CNOT1A5YKK6 2376 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 MYBPHLA2RUH7 354 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 ANTXRLA6NF34 631 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 CLIC2O15247 247 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 DDX3YO15523 660 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 EXTL3O43909 919 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 IL18RAPO95256 599 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 CST3P01034 146 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 PF4P02776 101 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 PDGFRBP09619 1106 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 ARSAP15289 507 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 GAP43P17677 238 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 TFE3P19532 575 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 CASP1P29466 404 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 DNAJA1P31689 397 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 HOXD13P35453 343 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 STAT6P42226 847 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 MAGEA9P43362 315 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 GALK1P51570 392 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 ATXN1P54253 815 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 NLRP12P59046 1061 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 SIM2Q14190 667 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 PUM1Q14671 1186 aaKnown RBP eCLIP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 VEPH1Q14D04 833 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 CCDC6Q16204 474 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 SV2CQ496J9 727 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 ARHGAP29Q52LW3 1261 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 SNAP47Q5SQN1 464 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 NAIF1Q69YI7 327 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 PKN3Q6P5Z2 889 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 CBWD2Q8IUF1 395 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 SCN4BQ8IWT1 228 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 DCP1BQ8IZD4 617 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 CMTM8Q8IZV2 173 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 CELF5Q8N6W0 485 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 OR5B17Q8NGF7 314 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 CXorf38Q8TB03 319 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 RIN3Q8TB24 985 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 CACTINQ8WUQ7 758 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 TTC9Q92623 222 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 USP13Q92995 863 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 E2F7Q96AV8 911 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 ELMO3Q96BJ8 720 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 CHFRQ96EP1 664 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 TMEM74Q96NL1 305 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 SLC22A12Q96S37 553 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 SPON2Q9BUD6 331 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 RSRP1Q9BUV0 290 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 MTMR12Q9C0I1 747 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 LINC00597Q9H2U6 94 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 C8orf33Q9H7E9 229 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 ZFYVE1Q9HBF4 777 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 TRPC7Q9HCX4 862 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 PARD6AQ9NPB6 346 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 HPS4Q9NQG7 708 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 PRMT8Q9NR22 394 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 RBAKQ9NYW8 714 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 STK17AQ9UEE5 414 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 SIX4Q9UIU6 781 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 DSEQ9UL01 958 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 USP18Q9UMW8 372 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 L1RE1Q9UN81 338 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 SMG5Q9UPR3 1016 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 EXOC7Q9UPT5 735 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 SNX9Q9Y5X1 595 aa5.03□□□□□ -1.6
GTF3C3-208ENST00000455546 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms