RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 HADHBP55084 474 aaKnown RBP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 JAM2P57087 298 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 ASIC1P78348 528 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 IFI35P80217 286 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 MGAT5Q09328 741 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 DHX34Q14147 1143 aaKnown RBP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 GRM4Q14833 912 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 FXNQ16595 210 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 CYP1B1Q16678 543 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 SBK1Q52WX2 424 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 WASHC2DQ5SRD0 308 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 HYIQ5T013 277 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 SLC35F1Q5T1Q4 408 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 NUGGCQ68CJ6 796 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 OR52E8Q6IFG1 317 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 VSTM1Q6UX27 236 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 USP51Q70EK9 711 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 ZNF571Q7Z3V5 609 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 SDCCAG8Q86SQ7 713 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 PNMA8AQ86V59 439 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 SESTD1Q86VW0 696 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 PROSER1Q86XN7 944 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 TRIM48Q8IWZ4 208 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 SYNE4Q8N205 404 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 FITM2Q8N6M3 262 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 SLC30A5Q8TAD4 765 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 PIP4K2CQ8TBX8 421 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 NEK9Q8TD19 979 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 ZNF384Q8TF68 577 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 CKAP2Q8WWK9 683 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 PRCCQ92733 491 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 INPP5DQ92835 1189 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 DNAJC19Q96DA6 116 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 BICD1Q96G01 975 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 FAM89AQ96GI7 184 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 IFT74Q96LB3 600 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 GNRHR2Q96P88 292 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 FMO2Q99518 471 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 SYT15Q9BQS2 421 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 ERP44Q9BS26 406 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 LSM14BQ9BX40 385 aaKnown RBP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 ZMYND12Q9H0C1 365 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 NSRP1Q9H0G5 558 aaKnown RBP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 DDX47Q9H0S4 455 aaKnown RBP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 CARD9Q9H257 536 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 LRMDAQ9H2I8 198 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 RNPEPL1Q9HAU8 725 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 SLC6A20Q9NP91 592 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 SIX2Q9NPC8 291 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 INTS9Q9NV88 658 aaKnown RBP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 CYP39A1Q9NYL5 469 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 SAMD15Q9P1V8 674 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 WDR35Q9P2L0 1181 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 NKX1-2Q9UD57 310 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 AMACRQ9UHK6 382 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 ADAM29Q9UKF5 820 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 PACSIN2Q9UNF0 486 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 TBC1D30Q9Y2I9 924 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 ARL2BPQ9Y2Y0 163 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 NR2E1Q9Y466 385 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 TCAF1Q9Y4C2 921 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 COL4A3BPQ9Y5P4 624 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 NPFFR2Q9Y5X5 522 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 BZW2Q9Y6E2 419 aaKnown RBP4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 NUP98P52948 1817 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 SPATA31A1Q5TZJ5 1347 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 PCDH11XQ9BZA7 1347 aa4.41□□□□□ -1.7
HMGB3P22-202ENST00000451823 ROBO3Q96MS0 1386 aa4.4□□□□□ -1.7
HMGB3P22-202ENST00000451823 BAZ2AQ9UIF9 1905 aaKnown RBP4.4□□□□□ -1.7
HMGB3P22-202ENST00000451823 MAST2Q6P0Q8 1798 aa4.4□□□□□ -1.7
HMGB3P22-202ENST00000451823 ESYT2A0FGR8 921 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 TTC36A6NLP5 189 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 OVOL3O00110 214 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 TP73O15350 636 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 RIPK2O43353 540 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC26A4O43511 780 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 CYTH3O43739 400 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 MAFKO60675 156 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 ATP2C2O75185 946 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 ATP5HO75947 161 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 RNF8O76064 485 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 SUN1O94901 812 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 UNC5CO95185 931 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 ENO2P09104 434 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 GNAT1P11488 350 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 COL6A1P12109 1028 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 RARGP13631 454 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 HSPA6P17066 643 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 GM2AP17900 193 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 SP100P23497 879 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 CTNNA2P26232 953 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 SMARCA1P28370 1054 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 ALDH3A1P30838 453 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 SSR1P43307 286 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 CTCFP49711 727 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 GNAQP50148 359 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 PEX5P50542 639 aa4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 RNASE9P60153 205 aaKnown RBP4.4□□□□□ -1.71
HMGB3P22-202ENST00000451823 POLR2FP61218 127 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms