RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 MSANTD4Q8NCY6 345 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 PJA1Q8NG27 643 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 CCDC26Q8TAB7 109 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 IPO4Q8TEX9 1081 aaKnown RBP12.64□□□□□ -0.39
SMPD4-212ENST00000451542 LRRC3BQ96PB8 259 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 ERGIC2Q96RQ1 377 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 IER2Q9BTL4 223 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 DCLK3Q9C098 648 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 MIS12Q9H081 205 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 EBF3Q9H4W6 596 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 ABCC13Q9NSE7 274 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 FAM207AQ9NSI2 230 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-212ENST00000451542 GTSE1Q9NYZ3 720 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 PCDHGC3Q9UN70 934 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 ZNF510Q9Y2H8 683 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 ARIH1Q9Y4X5 557 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-212ENST00000451542 FHOD1Q9Y613 1164 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 WNT6Q9Y6F9 365 aa12.64□□□□□ -0.39
SMPD4-212ENST00000451542 MIA3Q5JRA6 1907 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 TULP2O00295 520 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 CTHP32929 405 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 STAT1P42224 750 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 GPD2P43304 727 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 POLR2FP61218 127 aaKnown RBP12.63□□□□□ -0.39
SMPD4-212ENST00000451542 APBA1Q02410 837 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 PREPLQ4J6C6 727 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-212ENST00000451542 DGKKQ5KSL6 1271 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 BSPRYQ5W0U4 402 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 CWF19L1Q69YN2 538 aaKnown RBP12.63□□□□□ -0.39
SMPD4-212ENST00000451542 PMF1Q6P1K2 205 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 SCD5Q86SK9 330 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 DHX40Q8IX18 779 aaKnown RBP12.63□□□□□ -0.39
SMPD4-212ENST00000451542 FUCA2Q9BTY2 467 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 LHX5Q9H2C1 402 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 SYNCQ9H7C4 482 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 ECT2Q9H8V3 914 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 NMUR1Q9HB89 426 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 RASAL2Q9UJF2 1139 aa12.63□□□□□ -0.39
SMPD4-212ENST00000451542 F8VZ95 297 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 CAPN9O14815 690 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 TPM3P06753 285 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 VCPP55072 806 aaKnown RBP12.62□□□□□ -0.39
SMPD4-212ENST00000451542 DAOAP59103 153 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 TNK2Q07912 1038 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 EFEMP1Q12805 493 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 GRSF1Q12849 480 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMPD4-212ENST00000451542 PPP2R5DQ14738 602 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 EML3Q32P44 896 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 TRIM68Q6AZZ1 485 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 DENND1BQ6P3S1 775 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 NUDT18Q6ZVK8 323 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 HTR3DQ70Z44 454 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 ZNF677Q86XU0 584 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 MIB1Q86YT6 1006 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 SYNPOQ8N3V7 929 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 TMEM105Q8N8V8 129 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 TMEM35BQ8NCS4 154 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 TTC8Q8TAM2 541 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 ZSWIM1Q9BR11 485 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 NAA15Q9BXJ9 866 aaKnown RBP12.62□□□□□ -0.39
SMPD4-212ENST00000451542 KLF16Q9BXK1 252 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-212ENST00000451542 FOXQ1Q9C009 403 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 CBX8Q9HC52 389 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 NLRC4Q9NPP4 1024 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 HPS4Q9NQG7 708 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 MARCH2Q9P0N8 246 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 NDRG2Q9UN36 371 aaKnown RBP12.62□□□□□ -0.39
SMPD4-212ENST00000451542 ZNF318Q5VUA4 2279 aa12.62□□□□□ -0.39
SMPD4-212ENST00000451542 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-212ENST00000451542 TBX18O95935 607 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 LTFP02788 710 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 IRF1P10914 325 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 ATP1A3P13637 1013 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 ARSAP15289 507 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 CYP11B1P15538 503 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 DRD1P21728 446 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 CD72P21854 359 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 TARSP26639 723 aaKnown RBP12.61□□□□□ -0.39
SMPD4-212ENST00000451542 CLCN1P35523 988 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 SOX5P35711 763 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 CHKAP35790 457 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 RPS9P46781 194 aaKnown RBP12.61□□□□□ -0.39
SMPD4-212ENST00000451542 RPL34P49207 117 aaKnown RBP12.61□□□□□ -0.39
SMPD4-212ENST00000451542 HARS2P49590 506 aaKnown RBP12.61□□□□□ -0.39
SMPD4-212ENST00000451542 PTPN5P54829 565 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 GAD2Q05329 585 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 PDCLQ13371 301 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 IQCB1Q15051 598 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 TOGARAM2Q6ZUX3 1019 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 TMEM110Q86TL2 294 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 SLC47A2Q86VL8 602 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 ZDHHC17Q8IUH5 632 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 CCDC105Q8IYK2 499 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 DTWD2Q8NBA8 298 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 FAM149B1Q96BN6 582 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 PLD4Q96BZ4 506 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 PPP1R13BQ96KQ4 1090 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 P2RY13Q9BPV8 354 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
SMPD4-212ENST00000451542 GANQ9H2C0 597 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms