RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 CSRP3P50461 194 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 IFI35P80217 286 aaPredicted RBP6.89□□□□□ -1.31
USP46-202ENST00000451218 PLEKHG4Q58EX7 1191 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 FAM102AQ5T9C2 384 aaPredicted RBP6.89□□□□□ -1.31
USP46-202ENST00000451218 MAATS1Q7Z4T9 603 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 NPWQ8N729 165 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 ACTL9Q8TC94 416 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 EPS8L3Q8TE67 593 aaKnown RBP6.89□□□□□ -1.31
USP46-202ENST00000451218 VOPP1Q96AW1 172 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 SENP8Q96LD8 212 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 RNF157Q96PX1 679 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 TSEN34Q9BSV6 310 aaKnown RBP6.89□□□□□ -1.31
USP46-202ENST00000451218 TRIM31Q9BZY9 425 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 ABT1Q9ULW3 272 aaKnown RBP6.89□□□□□ -1.31
USP46-202ENST00000451218 FAM92AA1XBS5 289 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 APOC4-APOC2K7ER74 178 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 APOC2P02655 101 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 GNL1P36915 607 aaPredicted RBP6.89□□□□□ -1.31
USP46-202ENST00000451218 APLP1P51693 650 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 SCAPQ12770 1279 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 ANKRD20A8PQ5CZ79 823 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 SEL1L2Q5TEA6 688 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 LIN9Q5TKA1 542 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 ATL2Q8NHH9 583 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.89□□□□□ -1.31
USP46-202ENST00000451218 MAML1Q92585 1016 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 ATP6V1G3Q96LB4 118 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 FAM129AQ9BZQ8 928 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 CWC15Q9P013 229 aaKnown RBP6.89□□□□□ -1.31
USP46-202ENST00000451218 VPS18Q9P253 973 aa6.89□□□□□ -1.31
USP46-202ENST00000451218 MUC3AQ02505 3323 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 HMX2A2RU54 273 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 NRG2O14511 850 aaPredicted RBP6.88□□□□□ -1.31
USP46-202ENST00000451218 CXCL10P02778 98 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 NPR3P17342 541 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 RPL22P35268 128 aaKnown RBP6.88□□□□□ -1.31
USP46-202ENST00000451218 MMP13P45452 471 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 BRCC3P46736 316 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 PMS2P54278 862 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 BCAT1P54687 386 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 DHX9Q08211 1270 aaKnown RBP6.88□□□□□ -1.31
USP46-202ENST00000451218 CLUL1Q15846 466 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 CGB2Q6NT52 195 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 SYDE1Q6ZW31 735 aaPredicted RBP6.88□□□□□ -1.31
USP46-202ENST00000451218 FAM35AQ86V20 835 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 CAND1Q86VP6 1230 aaKnown RBP6.88□□□□□ -1.31
USP46-202ENST00000451218 RSPH1Q8WYR4 309 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 PGM2Q96G03 612 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 NAP1L3Q99457 506 aaPredicted RBP6.88□□□□□ -1.31
USP46-202ENST00000451218 LGALS13Q9UHV8 139 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 TIMM13Q9Y5L4 95 aaPredicted RBP6.88□□□□□ -1.31
USP46-202ENST00000451218 PTCH2Q9Y6C5 1203 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 PLXNB3Q9ULL4 1909 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 CASTOR2A6NHX0 329 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 DAB1O75553 588 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 KRT1P04264 644 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 THPOP40225 353 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 PNPLA4P41247 253 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 GATMP50440 423 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 PLTPP55058 493 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 DAOAP59103 153 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 FAM193AP78312 1265 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 MRPS5P82675 430 aaKnown RBP6.88□□□□□ -1.31
USP46-202ENST00000451218 PRKD1Q15139 912 aaPredicted RBP6.88□□□□□ -1.31
USP46-202ENST00000451218 TRIP13Q15645 432 aaPredicted RBP6.88□□□□□ -1.31
USP46-202ENST00000451218 MAP9Q49MG5 647 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 MFSD14CQ5VZR4 134 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 CES4AQ5XG92 561 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 SCD5Q86SK9 330 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 TTC9BQ8N6N2 239 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 ANKLE1Q8NAG6 615 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 FAM172AQ8WUF8 416 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 SNF8Q96H20 258 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 ZNF317Q96PQ6 595 aaPredicted RBP6.88□□□□□ -1.31
USP46-202ENST00000451218 CRISPLD2Q9H0B8 497 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 ZWILCHQ9H900 591 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 DDX56Q9NY93 547 aaKnown RBP6.88□□□□□ -1.31
USP46-202ENST00000451218 OGDHLQ9ULD0 1010 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 USTQ9Y2C2 406 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 MOXD2PA6NHM9 499 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 CYB561D2O14569 222 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 ECEL1O95672 775 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 MYO1EQ12965 1108 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 DSG2Q14126 1118 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 SPRED3Q2MJR0 410 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 SV2CQ496J9 727 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 AFMIDQ63HM1 303 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 CHRDL2Q6WN34 429 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 ZDHHC17Q8IUH5 632 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 CCDC26Q8TAB7 109 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 MYCBPAPQ8TBZ2 947 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 SUSD3Q96L08 255 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 HSFY1Q96LI6 401 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.88□□□□□ -1.31
USP46-202ENST00000451218 ASNSD1Q9NWL6 643 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 LCMT1Q9UIC8 334 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 UTP11Q9Y3A2 253 aaKnown RBP6.88□□□□□ -1.31
USP46-202ENST00000451218 HOXC13P31276 330 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 MATKP42679 507 aa6.88□□□□□ -1.31
USP46-202ENST00000451218 GBE1Q04446 702 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms