RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 DERAQ9Y315 318 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 HEY1Q9Y5J3 304 aa17.61■□□□□ 0.41
TOM1-210ENST00000449058 TRAFD1O14545 582 aaPredicted RBP17.6■□□□□ 0.41
TOM1-210ENST00000449058 PAPSS1O43252 624 aaPredicted RBP17.6■□□□□ 0.41
TOM1-210ENST00000449058 MARCH8Q5T0T0 291 aa17.6■□□□□ 0.41
TOM1-210ENST00000449058 PRPF39Q86UA1 669 aaKnown RBP17.6■□□□□ 0.41
TOM1-210ENST00000449058 CAND1Q86VP6 1230 aaKnown RBP17.6■□□□□ 0.41
TOM1-210ENST00000449058 PLEKHA5Q9HAU0 1116 aa17.6■□□□□ 0.41
TOM1-210ENST00000449058 PLAC1Q9HBJ0 212 aa17.6■□□□□ 0.41
TOM1-210ENST00000449058 ETNK2Q9NVF9 386 aa17.6■□□□□ 0.41
TOM1-210ENST00000449058 ZBED1O96006 694 aa17.6■□□□□ 0.41
TOM1-210ENST00000449058 HDAC4P56524 1084 aa17.6■□□□□ 0.41
TOM1-210ENST00000449058 TTLL12Q14166 644 aaPredicted RBP17.6■□□□□ 0.41
TOM1-210ENST00000449058 DCAF4L1Q3SXM0 396 aa17.6■□□□□ 0.41
TOM1-210ENST00000449058 ZNF410Q86VK4 478 aa17.6■□□□□ 0.41
TOM1-210ENST00000449058 SLC26A11Q86WA9 606 aa17.6■□□□□ 0.41
TOM1-210ENST00000449058 SCUBE3Q8IX30 993 aa17.6■□□□□ 0.41
TOM1-210ENST00000449058 STK32AQ8WU08 396 aa17.6■□□□□ 0.41
TOM1-210ENST00000449058 KLC2Q9H0B6 622 aa17.6■□□□□ 0.41
TOM1-210ENST00000449058 CNTN3Q9P232 1028 aa17.6■□□□□ 0.41
TOM1-210ENST00000449058 H3BRB1 525 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 PPEF2O14830 753 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 ANP32DO95626 131 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 GCLCP48506 637 aaPredicted RBP17.59■□□□□ 0.41
TOM1-210ENST00000449058 TAF1BQ53T94 588 aaPredicted RBP17.59■□□□□ 0.41
TOM1-210ENST00000449058 FAM182AQ5T1J6 154 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 ZDHHC17Q8IUH5 632 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 RFWD2Q8NHY2 731 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 CFAP36Q96G28 342 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 ZMAT2Q96NC0 199 aaKnown RBP17.59■□□□□ 0.41
TOM1-210ENST00000449058 KATNBL1Q9H079 304 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 TUT1Q9H6E5 874 aaKnown RBP17.59■□□□□ 0.41
TOM1-210ENST00000449058 SAR1AQ9NR31 198 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 FAM49BQ9NUQ9 324 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 NOP53Q9NZM5 478 aaKnown RBP17.59■□□□□ 0.41
TOM1-210ENST00000449058 ZNF180Q9UJW8 692 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 SNX9Q9Y5X1 595 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 PYGBP11216 843 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 PRKCHP24723 683 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 ZBTB6Q15916 424 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 CTC1Q2NKJ3 1217 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 TTC39BQ5VTQ0 682 aaPredicted RBP17.59■□□□□ 0.41
TOM1-210ENST00000449058 C4orf22Q6V702 233 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 CLNKQ7Z7G1 428 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 MCUQ8NE86 351 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 C11orf84Q9BUA3 381 aaPredicted RBP17.59■□□□□ 0.41
TOM1-210ENST00000449058 ZC3H7BQ9UGR2 993 aaKnown RBP17.59■□□□□ 0.41
TOM1-210ENST00000449058 ZFP69BQ9UJL9 534 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 C15orf41Q9Y2V0 281 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 NUMBLQ9Y6R0 609 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 KAT6AQ92794 2004 aa17.59■□□□□ 0.41
TOM1-210ENST00000449058 TRDMT1O14717 391 aaKnown RBP17.58■□□□□ 0.41
TOM1-210ENST00000449058 IL1BP01584 269 aa17.58■□□□□ 0.41
TOM1-210ENST00000449058 IBSPP21815 317 aaPredicted RBP17.58■□□□□ 0.41
TOM1-210ENST00000449058 ADCYAP1R1P41586 468 aa17.58■□□□□ 0.41
TOM1-210ENST00000449058 PTPN9P43378 593 aa17.58■□□□□ 0.41
TOM1-210ENST00000449058 OVGP1Q12889 678 aa17.58■□□□□ 0.41
TOM1-210ENST00000449058 PRKD1Q15139 912 aaPredicted RBP17.58■□□□□ 0.41
TOM1-210ENST00000449058 GRIK4Q16099 956 aa17.58■□□□□ 0.41
TOM1-210ENST00000449058 FAXCQ5TGI0 409 aa17.58■□□□□ 0.41
TOM1-210ENST00000449058 ARHGAP17Q68EM7 881 aa17.58■□□□□ 0.41
TOM1-210ENST00000449058 LRRC39Q96DD0 335 aa17.58■□□□□ 0.41
TOM1-210ENST00000449058 FAM111AQ96PZ2 611 aa17.58■□□□□ 0.41
TOM1-210ENST00000449058 TSSK1BQ9BXA7 367 aa17.58■□□□□ 0.41
TOM1-210ENST00000449058 NRDE2Q9H7Z3 1164 aa17.58■□□□□ 0.41
TOM1-210ENST00000449058 PDCD11Q14690 1871 aaKnown RBP17.58■□□□□ 0.4
TOM1-210ENST00000449058 TGDSO95455 350 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 NPTXRO95502 500 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 CBX6O95503 412 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 GSTA2P09210 222 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 CYP2C8P10632 490 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 DESP17661 470 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 TFE3P19532 575 aaPredicted RBP17.58■□□□□ 0.4
TOM1-210ENST00000449058 ADORA2AP29274 412 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 GJA5P36382 358 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 MAGEA3P43357 314 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 RASSF2P50749 326 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 SNX16P57768 344 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 DPYSL2Q16555 572 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 MTDHQ86UE4 582 aaKnown RBP17.58■□□□□ 0.4
TOM1-210ENST00000449058 LRRC6Q86X45 466 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 CDKL3Q8IVW4 592 aaPredicted RBP17.58■□□□□ 0.4
TOM1-210ENST00000449058 LRRC52Q8N7C0 313 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 GIMAP7Q8NHV1 300 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 CENPIQ92674 756 aaPredicted RBP17.58■□□□□ 0.4
TOM1-210ENST00000449058 SNX27Q96L92 541 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 TBC1D10AQ9BXI6 508 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 B3GNT5Q9BYG0 378 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 TRIM55Q9BYV6 548 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 ALG13Q9NP73 1137 aaKnown RBP17.58■□□□□ 0.4
TOM1-210ENST00000449058 HESX1Q9UBX0 185 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 LNPEPQ9UIQ6 1025 aa17.58■□□□□ 0.4
TOM1-210ENST00000449058 CXorf49A8MYA2 514 aaPredicted RBP17.57■□□□□ 0.4
TOM1-210ENST00000449058 APRTP07741 180 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 CYP2F1P24903 491 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 HOXA11P31270 313 aaPredicted RBP17.57■□□□□ 0.4
TOM1-210ENST00000449058 L1CAMP32004 1257 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 ZNF449Q6P9G9 518 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 UNC93AQ86WB7 457 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 GPRC5AQ8NFJ5 357 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms