RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 RTN3O95197 1032 aaPredicted RBP14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 VNN1O95497 513 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 OLFM2O95897 454 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 ABL1P00519 1130 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 OAS1P00973 400 aaKnown RBP14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 AFPP02771 609 aaKnown RBP14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 OPRD1P41143 372 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 EIF2DP41214 584 aaKnown RBP14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 KLK7P49862 253 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 AP3M2P53677 418 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 ZXDBP98169 803 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 APBA1Q02410 837 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 TAF10Q12962 218 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 BIRC3Q13489 604 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 CCDC6Q16204 474 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 NUP93Q8N1F7 819 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 PDZD8Q8NEN9 1154 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 TAS1R2Q8TE23 839 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 OVCA2Q8WZ82 227 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 CRACR2AQ9BSW2 395 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 LSM14BQ9BX40 385 aaKnown RBP14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 XPO4Q9C0E2 1151 aaKnown RBP14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 NDST4Q9H3R1 872 aa14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 HELZP42694 1942 aaKnown RBP14.54□□□□□ -0.08
PDLIM2-213ENST00000448520 MYO16Q9Y6X6 1858 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 ATP8B3O60423 1300 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 A0A0A0MRY4 1105 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 GOLGA6L3A6NEY3 463 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 PHACTR2O75167 634 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 ALDH1A2O94788 518 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 HLA-DRAP01903 254 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 YWHAQP27348 245 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 GBP1P32455 592 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 MXI1P50539 228 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 CREB5Q02930 508 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 DHCR24Q15392 516 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 ZACNQ401N2 412 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 PREPLQ4J6C6 727 aaPredicted RBP14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 C2orf27AQ580R0 203 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 RNF43Q68DV7 783 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 RASSF3Q86WH2 238 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 B3GALNT2Q8NCR0 500 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 ANKRD20A12PQ8NF67 263 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 OTUB2Q96DC9 234 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 PNKPQ96T60 521 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 VRTNQ9H8Y1 702 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 GRPEL1Q9HAV7 217 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 TMEM8AQ9HCN3 771 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 RTN4Q9NQC3 1192 aaKnown RBP14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 RXFP3Q9NSD7 469 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 COMMD8Q9NX08 183 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 NXF1Q9UBU9 619 aaKnown RBP14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 MMP17Q9ULZ9 603 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 CPQQ9Y646 472 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 MAP1BP46821 2468 aaKnown RBP14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 PI4KAP42356 2102 aa14.53□□□□□ -0.08
PDLIM2-213ENST00000448520 A0A1B0GTH6 734 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 E2F8A0AVK6 867 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 LRRC10BA6NIK2 292 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 DCLK1O15075 740 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 ADH1CP00326 375 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 APODP05090 189 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 CYP17A1P05093 508 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 MBL2P11226 248 aaPredicted RBP14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 KCNA4P22459 653 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 PIK3CAP42336 1068 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 TNFRSF4P43489 277 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 UBASH3AP57075 661 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 MYL6P60660 151 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 UBXN1Q04323 297 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 ENPEPQ07075 957 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 KCNMA1Q12791 1236 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 CRY1Q16526 586 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 GAB4Q2WGN9 574 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 N4BP2L1Q5TBK1 243 aaPredicted RBP14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 SPOPLQ6IQ16 392 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 RHBDF2Q6PJF5 856 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 TNIP3Q96KP6 325 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 B3GNT5Q9BYG0 378 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 XYLT2Q9H1B5 865 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 ANGPTL2Q9UKU9 493 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 NME7Q9Y5B8 376 aa14.52□□□□□ -0.09
PDLIM2-213ENST00000448520 KHNYNO15037 678 aaKnown RBP14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 STX10O60499 249 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 SLC9A1P19634 815 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 PMLP29590 882 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 GTF2H1P32780 548 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 GRIA2P42262 883 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 SEC13P55735 322 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 SHC2P98077 582 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 LRMPQ12912 555 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 NCOA4Q13772 614 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 BYSLQ13895 437 aaKnown RBP14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 GSE1Q14687 1217 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 NR1I3Q14994 352 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 ST3GAL2Q16842 350 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 HECTD3Q5T447 861 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 SNX30Q5VWJ9 437 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 DAB2IPQ5VWQ8 1189 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms