RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 BICDL2A1A5D9 508 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 RPP40O75818 363 aaKnown RBP18.63■□□□□ 0.57
DDX56-207ENST00000448192 KAT7O95251 611 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 APBB3O95704 486 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 RETP07949 1114 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 EIF2DP41214 584 aaKnown RBP18.63■□□□□ 0.57
DDX56-207ENST00000448192 PSEN1P49768 467 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 STX17P56962 302 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 MESP2Q0VG99 397 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 GOLGA7BQ2TAP0 167 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 ARHGAP17Q68EM7 881 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 HTR3DQ70Z44 454 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 SCD5Q86SK9 330 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 PIGZQ86VD9 579 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 TMEM25Q86YD3 366 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 SFTPA1Q8IWL2 248 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 CCDC33Q8N5R6 958 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 ANKRD52Q8NB46 1076 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 PARD6AQ9NPB6 346 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 SPHK2Q9NRA0 654 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 DNMT3LQ9UJW3 386 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 LSM7Q9UK45 103 aaKnown RBP18.63■□□□□ 0.57
DDX56-207ENST00000448192 USP3Q9Y6I4 520 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 SPAG17Q6Q759 2223 aa18.63■□□□□ 0.57
DDX56-207ENST00000448192 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.62■□□□□ 0.57
DDX56-207ENST00000448192 AXIN1O15169 862 aa18.62■□□□□ 0.57
DDX56-207ENST00000448192 RALAP11233 206 aa18.62■□□□□ 0.57
DDX56-207ENST00000448192 CD19P15391 556 aa18.62■□□□□ 0.57
DDX56-207ENST00000448192 TBXAS1P24557 533 aaPredicted RBP18.62■□□□□ 0.57
DDX56-207ENST00000448192 SGO2Q562F6 1265 aa18.62■□□□□ 0.57
DDX56-207ENST00000448192 TTC30AQ86WT1 665 aa18.62■□□□□ 0.57
DDX56-207ENST00000448192 UBXN6Q9BZV1 441 aa18.62■□□□□ 0.57
DDX56-207ENST00000448192 TSPAN16Q9UKR8 245 aa18.62■□□□□ 0.57
DDX56-207ENST00000448192 DNAH14Q0VDD8 3507 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 HOXC11O43248 304 aaPredicted RBP18.61■□□□□ 0.57
DDX56-207ENST00000448192 TGM1P22735 817 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 TIE1P35590 1138 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 GRIA2P42262 883 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 PLA2G4AP47712 749 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 DGKEP52429 567 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 MRPS21P82921 87 aaKnown RBP18.61■□□□□ 0.57
DDX56-207ENST00000448192 PAK1Q13153 545 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 RSPO4Q2I0M5 234 aaPredicted RBP18.61■□□□□ 0.57
DDX56-207ENST00000448192 KLHDC10Q6PID8 442 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 CACNA2D4Q7Z3S7 1137 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 TADA2BQ86TJ2 420 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 MIB1Q86YT6 1006 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 ALLCQ8N6M5 410 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 TSTD1Q8NFU3 115 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 NT5C1BQ96P26 610 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 CLIC5Q9NZA1 410 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 DEC1Q9P2X7 70 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 HESX1Q9UBX0 185 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 MMP17Q9ULZ9 603 aa18.61■□□□□ 0.57
DDX56-207ENST00000448192 GREM1O60565 184 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 TULP3O75386 442 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 KLF8O95600 359 aaPredicted RBP18.6■□□□□ 0.57
DDX56-207ENST00000448192 BCAT1P54687 386 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 UBE2HP62256 183 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 LMNB2Q03252 620 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 PDE4CQ08493 712 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 CETN1Q12798 172 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 CAMK4Q16566 473 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 RAB41Q5JT25 222 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 EMC10Q5UCC4 262 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 FOXR2Q6PJQ5 311 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 TMEM270Q6UE05 265 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 TPGS1Q6ZTW0 290 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 KBTBD6Q86V97 674 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 ETFBKMTQ8IXQ9 262 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 ARHGAP18Q8N392 663 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 PPM1KQ8N3J5 372 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 UBA3Q8TBC4 463 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 CDK5RAP1Q96SZ6 601 aaKnown RBP18.6■□□□□ 0.57
DDX56-207ENST00000448192 SRRTQ9BXP5 876 aaKnown RBP18.6■□□□□ 0.57
DDX56-207ENST00000448192 ZDHHC4Q9NPG8 344 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 RASAL2Q9UJF2 1139 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 PCDHB4Q9Y5E5 795 aa18.6■□□□□ 0.57
DDX56-207ENST00000448192 A0A0A0MRY4 1105 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 TBC1D3BA6NDS4 549 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 NEDD8-MDP1E9PL57 170 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 TULP2O00295 520 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 LRP3O75074 770 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 GNA14O95837 355 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 HMBSP08397 361 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 VDRP11473 427 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 TNFRSF4P43489 277 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 TKTL1P51854 596 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 YWHAGP61981 247 aaKnown RBP eCLIP18.59■□□□□ 0.57
DDX56-207ENST00000448192 EFEMP1Q12805 493 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 PUM1Q14671 1186 aaKnown RBP eCLIP18.59■□□□□ 0.57
DDX56-207ENST00000448192 PREPLQ4J6C6 727 aaPredicted RBP18.59■□□□□ 0.57
DDX56-207ENST00000448192 RSRC2Q7L4I2 434 aaKnown RBP18.59■□□□□ 0.57
DDX56-207ENST00000448192 PHTF2Q8N3S3 785 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 ZNF276Q8N554 614 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 UBR7Q8N806 425 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 IL17RCQ8NAC3 791 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 TXNDC5Q8NBS9 432 aaKnown RBP18.59■□□□□ 0.57
DDX56-207ENST00000448192 BBS2Q9BXC9 721 aa18.59■□□□□ 0.57
DDX56-207ENST00000448192 LRRC4Q9HBW1 653 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms