RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 HNF1BP35680 557 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 ZNF131P52739 623 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 GTF2BQ00403 316 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 GUCY1B3Q02153 619 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 KCNC4Q03721 635 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 TAF10Q12962 218 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 CCDC142Q17RM4 750 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 ANO4Q32M45 955 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 DCAF12L1Q5VU92 463 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 TDRD10Q5VZ19 366 aaKnown RBP7.54□□□□□ -1.2
LRRC28-203ENST00000447360 GRAMD4Q6IC98 578 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 PCSK4Q6UW60 755 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 DHRS13Q6UX07 377 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 KIAA1324Q6UXG2 1013 aaKnown RBP7.54□□□□□ -1.2
LRRC28-203ENST00000447360 CRELD2Q6UXH1 353 aaPredicted RBP7.54□□□□□ -1.2
LRRC28-203ENST00000447360 OSTM1Q86WC4 334 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 TMEM25Q86YD3 366 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 LURAP1LQ8IV03 231 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 ADGRF2Q8IZF7 708 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 MYCT1Q8N699 235 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 C1orf127Q8N9H9 656 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 FBXO18Q8NFZ0 1043 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 C1orf216Q8TAB5 229 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 SNIP1Q8TAD8 396 aaKnown RBP7.54□□□□□ -1.2
LRRC28-203ENST00000447360 CACTINQ8WUQ7 758 aaKnown RBP7.54□□□□□ -1.2
LRRC28-203ENST00000447360 PTCD2Q8WV60 388 aaKnown RBP7.54□□□□□ -1.2
LRRC28-203ENST00000447360 C8orf76Q96K31 380 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 C8orf48Q96LL4 319 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 XPO6Q96QU8 1125 aaKnown RBP7.54□□□□□ -1.2
LRRC28-203ENST00000447360 ACOX2Q99424 681 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 GPR174Q9BXC1 333 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 NRSN2Q9GZP1 204 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 PCED1AQ9H1Q7 454 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 CD93Q9NPY3 652 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 ITGA11Q9UKX5 1188 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 CDH9Q9ULB4 789 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 AGAP1Q9UPQ3 857 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 BTBD3Q9Y2F9 522 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 PCDHGA1Q9Y5H4 931 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 SNX9Q9Y5X1 595 aa7.54□□□□□ -1.2
LRRC28-203ENST00000447360 KNL1Q8NG31 2342 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 OBSL1O75147 1896 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 COL6A6A6NMZ7 2263 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 SCN1AP35498 2009 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 NPHP3-ACAD11A0A0J9YXS1 232 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 A0A1B0GVT2 93 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 ANKRD63C9JTQ0 380 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 NPC1O15118 1278 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 TRIM24O15164 1050 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 PAPSS1O43252 624 aaPredicted RBP7.53□□□□□ -1.2
LRRC28-203ENST00000447360 CACNG3O60359 315 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 IGLV3-19P01714 112 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 C1SP09871 688 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 RBP5P82980 135 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 TFAMQ00059 246 aaKnown RBP7.53□□□□□ -1.2
LRRC28-203ENST00000447360 SEMG2Q02383 582 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 TLE3Q04726 772 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 MYO1EQ12965 1108 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 GNL2Q13823 731 aaKnown RBP7.53□□□□□ -1.2
LRRC28-203ENST00000447360 STARD3Q14849 445 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 RTP5Q14D33 572 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 POSTNQ15063 836 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 RABEP1Q15276 862 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 SF3A1Q15459 793 aaKnown RBP7.53□□□□□ -1.2
LRRC28-203ENST00000447360 ZRSR1Q15695 479 aaKnown RBP7.53□□□□□ -1.2
LRRC28-203ENST00000447360 IL17AQ16552 155 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 SOWAHAQ2M3V2 549 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 KIF19Q2TAC6 998 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 INAVAQ3KP66 663 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 SNX30Q5VWJ9 437 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 LIMS2Q7Z4I7 341 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 BBS7Q8IWZ6 715 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 PDZD8Q8NEN9 1154 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 CXorf38Q8TB03 319 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 SCFD1Q8WVM8 642 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 OVCA2Q8WZ82 227 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 FGF11Q92914 225 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 IGSF8Q969P0 613 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 MYLPFQ96A32 169 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 ZFRQ96KR1 1074 aaKnown RBP7.53□□□□□ -1.2
LRRC28-203ENST00000447360 FIZ1Q96SL8 496 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 SYT15Q9BQS2 421 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 REEP2Q9BRK0 252 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 NUP58Q9BVL2 599 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 SLC6A17Q9H1V8 727 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 ST6GALNAC4Q9H4F1 302 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 OSGEPQ9NPF4 335 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 DNAJC17Q9NVM6 304 aaKnown RBP7.53□□□□□ -1.2
LRRC28-203ENST00000447360 GMIPQ9P107 970 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 WDR35Q9P2L0 1181 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 EIF2B4Q9UI10 523 aaKnown RBP7.53□□□□□ -1.2
LRRC28-203ENST00000447360 SH3BP1Q9Y3L3 701 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 RAD54BQ9Y620 910 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 AK5Q9Y6K8 562 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 CABIN1Q9Y6J0 2220 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 MYO18AQ92614 2054 aaKnown RBP7.53□□□□□ -1.2
LRRC28-203ENST00000447360 PTPN13Q12923 2485 aa7.53□□□□□ -1.2
LRRC28-203ENST00000447360 TEX15Q9BXT5 2789 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 SHROOM3Q8TF72 1996 aa7.52□□□□□ -1.21
LRRC28-203ENST00000447360 B8ZZF3 427 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms