RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ADAMTS9Q9P2N4 1935 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 CHADO15335 359 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 GPR32O75388 356 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 CSDE1O75534 798 aaKnown RBP5.6□□□□□ -1.51
SDCBP-205ENST00000447267 CLDN1O95832 211 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 POMCP01189 267 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 RPLP2P05387 115 aaKnown RBP5.6□□□□□ -1.51
SDCBP-205ENST00000447267 GSNP06396 782 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 IFNGR1P15260 489 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 HOXA13P31271 388 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-205ENST00000447267 P2RY2P41231 377 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 OR1G1P47890 313 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 CYP4F8P98187 520 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 PTH1RQ03431 593 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 GRSF1Q12849 480 aaKnown RBP eCLIP5.6□□□□□ -1.51
SDCBP-205ENST00000447267 ANKRD39Q53RE8 183 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 ZNF385BQ569K4 471 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 C1orf228Q6PIY5 440 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 GLB1LQ6UWU2 654 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 CCDC81Q6ZN84 652 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 TMC6Q7Z403 805 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 DHX40Q8IX18 779 aaKnown RBP5.6□□□□□ -1.51
SDCBP-205ENST00000447267 RNF168Q8IYW5 571 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-205ENST00000447267 TP53I13Q8NBR0 393 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-205ENST00000447267 MDGA1Q8NFP4 955 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 SSC4DQ8WTU2 575 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 KCNE4Q8WWG9 221 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 RABGGTAQ92696 567 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 PCYT2Q99447 389 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 CLSTN3Q9BQT9 956 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 MCMBPQ9BTE3 642 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 TTPALQ9BTX7 342 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 SRRTQ9BXP5 876 aaKnown RBP5.6□□□□□ -1.51
SDCBP-205ENST00000447267 XYLT2Q9H1B5 865 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 FNIP2Q9P278 1114 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 COL4A2P08572 1712 aa5.6□□□□□ -1.51
SDCBP-205ENST00000447267 NBASA2RRP1 2371 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 ZBED9Q6R2W3 1325 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 WDR19Q8NEZ3 1342 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 THADAQ6YHU6 1953 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 FGF10O15520 208 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-205ENST00000447267 TNFSF14O43557 240 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 HNRNPLP14866 589 aaKnown RBP eCLIP5.59□□□□□ -1.51
SDCBP-205ENST00000447267 IGFBP6P24592 240 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-205ENST00000447267 CCND2P30279 289 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 GRIK2Q13002 908 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 PLEKHN1Q494U1 663 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-205ENST00000447267 TCERG1LQ5VWI1 586 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 RASSF3Q86WH2 238 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 FAM129CQ86XR2 697 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 OLIG1Q8TAK6 271 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 DCAF4Q8WV16 495 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 CHFRQ96EP1 664 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 DHRS1Q96LJ7 313 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 FAM193BQ96PV7 902 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-205ENST00000447267 FERD3LQ96RJ6 166 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 TM9SF2Q99805 663 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 DSCC1Q9BVC3 393 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 UBA5Q9GZZ9 404 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 SMARCAD1Q9H4L7 1026 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 GAREM1Q9H706 876 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 IL17RBQ9NRM6 502 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 TM7SF3Q9NS93 570 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 SMC4Q9NTJ3 1288 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 DKK3Q9UBP4 350 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 FBLN5Q9UBX5 448 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 STK39Q9UEW8 545 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 CELSR2Q9HCU4 2923 aa5.59□□□□□ -1.51
SDCBP-205ENST00000447267 CENPEQ02224 2701 aa5.59□□□□□ -1.52
SDCBP-205ENST00000447267 KNTC1P50748 2209 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 MED13LQ71F56 2210 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 CBX4O00257 560 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 MOSPD3O75425 235 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 C1RP00736 705 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 MPOP05164 745 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 PTPN2P17706 415 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 CD247P20963 164 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 GUCY2CP25092 1073 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 HOXA9P31269 272 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 HNF1BP35680 557 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 UQCRFS1P47985 274 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 KRTAP10-2P60368 255 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 MRPS9P82933 396 aaKnown RBP5.58□□□□□ -1.52
SDCBP-205ENST00000447267 ZNF33AQ06730 810 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 LAPTM5Q13571 262 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 RALBP1Q15311 655 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 HES3Q5TGS1 186 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 FAM43BQ6ZT52 329 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-205ENST00000447267 MAMDC2Q7Z304 686 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-205ENST00000447267 MCF2L2Q86YR7 1114 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 SLC41A1Q8IVJ1 513 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 CCDC33Q8N5R6 958 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 SYT8Q8NBV8 401 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 SEPT1Q8WYJ6 367 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 CNOT6LQ96LI5 555 aaKnown RBP5.58□□□□□ -1.52
SDCBP-205ENST00000447267 ANP32EQ9BTT0 268 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 ZCCHC4Q9H5U6 513 aa5.58□□□□□ -1.52
SDCBP-205ENST00000447267 METTL5Q9NRN9 209 aaKnown RBP5.58□□□□□ -1.52
SDCBP-205ENST00000447267 ARPP21Q9UBL0 812 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-205ENST00000447267 FHOD1Q9Y613 1164 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms