RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 GTSE1Q9NYZ3 720 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 DNMT3LQ9UJW3 386 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 MRPS17Q9Y2R5 130 aaKnown RBP18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 SH3BP1Q9Y3L3 701 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 WNT6Q9Y6F9 365 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 COL4A2P08572 1712 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 KANSL1LA0AUZ9 987 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 SLC9A3R1O14745 358 aaPredicted RBP18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 EPHB6O15197 1021 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 TEX33O43247 280 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 CYP11B1P15538 503 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 AOC1P19801 751 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 STAT1P42224 750 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 CLCN5P51795 746 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 MLLT6P55198 1093 aaPredicted RBP18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 DAOAP59103 153 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 RUNX3Q13761 415 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 CWF19L1Q69YN2 538 aaKnown RBP18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 TRIM68Q6AZZ1 485 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 C1orf228Q6PIY5 440 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 LRSAM1Q6UWE0 723 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 CACNA2D4Q7Z3S7 1137 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 PASD1Q8IV76 773 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 CPA6Q8N4T0 437 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 NDRG1Q92597 394 aaKnown RBP18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 ZFRQ96KR1 1074 aaKnown RBP18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 DDX23Q9BUQ8 820 aaKnown RBP18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 NUDT5Q9UKK9 219 aa18.31■□□□□ 0.52
SMARCAL1-209ENST00000444508 A0A1B0GTH6 734 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 E2F8A0AVK6 867 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 YJEFN3A6XGL0 299 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 E7ENQ6 273 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 SART1O43290 800 aaKnown RBP18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 GFPT2O94808 682 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 IRF1P10914 325 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 SOX5P35711 763 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 RPL34P49207 117 aaKnown RBP18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 JAM2P57087 298 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 SNX16P57768 344 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 EFEMP1Q12805 493 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 PDCLQ13371 301 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 UBXN2BQ14CS0 331 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 BSPRYQ5W0U4 402 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 MIB1Q86YT6 1006 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 RNF139Q8WU17 664 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 KLF16Q9BXK1 252 aaPredicted RBP18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 SLC4A5Q9BY07 1137 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 MIS12Q9H081 205 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 LHX5Q9H2C1 402 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 HPS4Q9NQG7 708 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 ABCC13Q9NSE7 274 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 OLA1Q9NTK5 396 aaKnown RBP18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 TBC1D14Q9P2M4 693 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 RASAL2Q9UJF2 1139 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 LSM7Q9UK45 103 aaKnown RBP18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 STRIP2Q9ULQ0 834 aa18.3■□□□□ 0.52
SMARCAL1-209ENST00000444508 SPECC1L-ADORA2AF8WAN1 911 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 MDM4O15151 490 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 NFATC1O95644 943 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 ARSAP15289 507 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 CD72P21854 359 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 AVPR2P30518 371 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 SOX9P48436 509 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 VCPP55072 806 aaKnown RBP18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 FANCCQ00597 558 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 AMPD2Q01433 879 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 NR1H3Q13133 447 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 EML3Q32P44 896 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 TAF3Q5VWG9 929 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 BHLHA9Q7RTU4 235 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 RALGPS2Q86X27 583 aaPredicted RBP18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 C1orf131Q8NDD1 294 aaKnown RBP18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 FAM3CQ92520 227 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 NAP1L5Q96NT1 182 aaPredicted RBP18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 NELL2Q99435 816 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 FOXQ1Q9C009 403 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 ECT2Q9H8V3 914 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 LTB4R2Q9NPC1 389 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 CYTH4Q9UIA0 394 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 SIT1Q9Y3P8 196 aa18.29■□□□□ 0.52
SMARCAL1-209ENST00000444508 COL4A3Q01955 1670 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 A0A1W2PQC6 194 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 E5RJQ4 531 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 SCAMP3O14828 347 aaKnown RBP18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 GABBR2O75899 941 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 COG7P83436 770 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 TMEM110Q86TL2 294 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 NOP9Q86U38 636 aaKnown RBP18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 ZNF677Q86XU0 584 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 SCUBE3Q8IX30 993 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 TMEM35BQ8NCS4 154 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 PJA1Q8NG27 643 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 CLEC4CQ8WTT0 213 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 EDEM1Q92611 657 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 OTUB2Q96DC9 234 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 PPP1R13BQ96KQ4 1090 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 TRIM62Q9BVG3 475 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 LINC00597Q9H2U6 94 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 SYNCQ9H7C4 482 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 MARCH2Q9P0N8 246 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms