RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 NCANO14594 1321 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 NID2Q14112 1375 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 SPATA31C2B4DYI2 1134 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 CHRM3P20309 590 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 SOX11P35716 441 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 CNGA3Q16281 694 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 DCUN1D1Q96GG9 259 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 CDT1Q9H211 546 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 PFDN1O60925 122 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 CCNE2O96020 404 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 ACVR2BQ13705 512 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 TBCCQ15814 346 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 PDCD2Q16342 344 aaPredicted RBP23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 MTDHQ86UE4 582 aaKnown RBP23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 HES2Q9Y543 173 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 NFASCO94856 1347 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 APOC4-APOC2K7ER74 178 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 SKAP2O75563 359 aaPredicted RBP23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 APOC2P02655 101 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 NCKAP1LP55160 1127 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 EFEMP1Q12805 493 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 C15orf59Q2T9L4 293 aaPredicted RBP23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 PTRHD1Q6GMV3 140 aaKnown RBP23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 KIRREL3Q8IZU9 778 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 CXorf38Q8TB03 319 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 CD248Q9HCU0 757 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 DCDC2Q9UHG0 476 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 RIPK3Q9Y572 518 aa23.15■■□□□ 1.3
CTDSPL-206ENST00000443503 YDJCA8MPS7 323 aa23.14■■□□□ 1.3
CTDSPL-206ENST00000443503 ARHGAP18Q8N392 663 aa23.14■■□□□ 1.3
CTDSPL-206ENST00000443503 TRPM4Q8TD43 1214 aa23.14■■□□□ 1.3
CTDSPL-206ENST00000443503 ZC3H15Q8WU90 426 aaKnown RBP23.14■■□□□ 1.3
CTDSPL-206ENST00000443503 PCDHB7Q9Y5E2 793 aa23.14■■□□□ 1.3
CTDSPL-206ENST00000443503 MAFO75444 373 aaPredicted RBP23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 AKT1P31749 480 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 COPAP53621 1224 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 AQP5P55064 265 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 RPL7AP62424 266 aaKnown RBP23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 RPL10AP62906 217 aaKnown RBP23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 MPP3Q13368 585 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 ZRANB3Q5FWF4 1079 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 TCP10LQ8TDR4 215 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 MROH7Q68CQ1 1323 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 STX7O15400 261 aaKnown RBP23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 PLA2G6O60733 806 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 RHOBTB1O94844 696 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 LYPLA2O95372 231 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 GJB1P08034 283 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 GHRP10912 638 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 SLC6A3Q01959 620 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 KCNT2Q6UVM3 1135 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 MOB2Q70IA6 237 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 ZNF410Q86VK4 478 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 DNAJC9Q8WXX5 260 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 CD274Q9NZQ7 290 aa23.14■■□□□ 1.29
CTDSPL-206ENST00000443503 NOL4O94818 638 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 SUPT7LO94864 414 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 KDELR1P24390 212 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 ALDH1A3P47895 512 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 ALDH7A1P49419 539 aaKnown RBP23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 SPDYAQ5MJ70 313 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 EEF1DP3Q658K8 133 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 SLC13A4Q9UKG4 626 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 SLC4A7Q9Y6M7 1214 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 HIST1H2AGP0C0S8 130 aaPredicted RBP23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 HIST1H2ADP20671 130 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 SKOR1P84550 965 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 MED21Q13503 144 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 HIST1H2AHQ96KK5 128 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 HIST1H2AJQ99878 128 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 H2AFJQ9BTM1 129 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 COLEC11Q9BWP8 271 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 CTNNAL1Q9UBT7 734 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 DNAJC16Q9Y2G8 782 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 O00370 1275 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 ZNF197O14709 1029 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 RBL1P28749 1068 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 PTPN7P35236 360 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 KLC1Q07866 573 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 MGAT5Q09328 741 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 MFSD10Q14728 455 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 CTXN3Q4LDR2 81 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 OVOS1Q6IE37 1185 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 FAM136AQ96C01 138 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 TNFSF13BQ9Y275 285 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 SHBGP04278 402 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 APOA4P06727 396 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 ETS1P14921 441 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 PRUNE1Q86TP1 453 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 NT5DC4Q86YG4 428 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 HTR3CQ8WXA8 447 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 SEMA4DQ92854 862 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 PKP3Q9Y446 797 aa23.13■■□□□ 1.29
CTDSPL-206ENST00000443503 SERPINB8P50452 374 aa23.12■■□□□ 1.29
CTDSPL-206ENST00000443503 NOMO3P69849 1222 aa23.12■■□□□ 1.29
CTDSPL-206ENST00000443503 PCYOX1LQ8NBM8 494 aa23.12■■□□□ 1.29
CTDSPL-206ENST00000443503 KREMEN1Q96MU8 473 aa23.12■■□□□ 1.29
CTDSPL-206ENST00000443503 PCYOX1Q9UHG3 505 aa23.12■■□□□ 1.29
CTDSPL-206ENST00000443503 CCDC130P13994 396 aa23.12■■□□□ 1.29
CTDSPL-206ENST00000443503 CYTH1Q15438 398 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms