RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 BNIP3LO60238 219 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 FERP16591 822 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 MARCKSL1P49006 195 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 PFKPQ01813 784 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 HYAL1Q12794 435 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 MTMR3Q13615 1198 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 DDR2Q16832 855 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 C10orf120Q5SQS8 335 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 WLSQ5T9L3 541 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 CCDC181Q5TID7 509 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 TPGS2Q68CL5 300 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 ARHGEF19Q8IW93 802 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 IFT81Q8WYA0 676 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 KCNN1Q92952 543 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 KIF9Q9HAQ2 790 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 CA14Q9ULX7 337 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 BPTFQ12830 3046 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 RIF1Q5UIP0 2472 aaKnown RBP7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 EBAG9O00559 213 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 MAP3K13O43283 966 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 CLASP2O75122 1294 aaKnown RBP7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 GDI1P31150 447 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 CYP24A1Q07973 514 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 PPP3CAQ08209 521 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 DRAP1Q14919 205 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 SGO2Q562F6 1265 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 ANKRD54Q6NXT1 300 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 DENND5BQ6ZUT9 1274 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 MTSS1LQ765P7 747 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 CEP68Q76N32 757 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 MIB1Q86YT6 1006 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 SLC20A1Q8WUM9 679 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 TRMT61BQ9BVS5 477 aaKnown RBP7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 APEX2Q9UBZ4 518 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 SLC12A4Q9UP95 1085 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 A0A1W2PRU2 124 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 TCRBV7S2A1N4TA0A589 114 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 FOXN3O00409 490 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 SCAMP3O14828 347 aaKnown RBP7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 MED7O43513 233 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 TBC1D4O60343 1298 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 LIG3P49916 1009 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 TMEM173Q86WV6 379 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 KLHL7Q8IXQ5 586 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 KRT35Q92764 455 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 FAM84AQ96KN4 292 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 TSPAN18Q96SJ8 248 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 ERP44Q9BS26 406 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 HERPUD2Q9BSE4 406 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 TRIM51Q9BSJ1 452 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 NIF3L1Q9GZT8 377 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 MIS12Q9H081 205 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 FAM107BQ9H098 131 aa7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 INTS2Q9H0H0 1204 aaKnown RBP7.72□□□□□ -1.17
CDC42BPA-208ENST00000442054 TRAV19A0A0A6YYK7 116 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 STBD1O95210 358 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 H2AFZP0C0S5 128 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 CYP3A5P20815 502 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 TBXAS1P24557 533 aaPredicted RBP7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 CDH8P55286 799 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 NTHL1P78549 312 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 SMARCB1Q12824 385 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 DUSP6Q16828 381 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 ANKRD20A8PQ5CZ79 823 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 RNF219Q5W0B1 726 aaPredicted RBP7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 CCDC70Q6NSX1 233 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 H2AFVQ71UI9 128 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 ZNF598Q86UK7 904 aaKnown RBP7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 CCDC13Q8IYE1 715 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 FAM71AQ8IYT1 594 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 CLP1Q92989 425 aaKnown RBP7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 ART4Q93070 314 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 SUSD3Q96L08 255 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 MFSD14AQ96MC6 490 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 KREMEN1Q96MU8 473 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 HERC2P3Q9BVR0 1158 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 OXCT2Q9BYC2 517 aaPredicted RBP7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 RABEP2Q9H5N1 569 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 RAB20Q9NX57 234 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 CHORDC1Q9UHD1 332 aaPredicted RBP7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 CPSF3Q9UKF6 684 aaKnown RBP7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 COQ4Q9Y3A0 265 aa7.71□□□□□ -1.17
CDC42BPA-208ENST00000442054 CYP1A2P05177 515 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 YWHAQP27348 245 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 HOXC8P31273 242 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 ATICP31939 592 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 PPP2R2AP63151 447 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 XRCC4Q13426 336 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 TCTN1Q2MV58 587 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 CEP85LQ5SZL2 805 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 OR6B2Q6IFH4 312 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 MAGEC3Q8TD91 643 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 PRKD2Q9BZL6 878 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 ELOVL4Q9GZR5 314 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 DNAJC12Q9UKB3 198 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 DERAQ9Y315 318 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 MYH9P35579 1960 aaKnown RBP7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 TET1Q8NFU7 2136 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 GMNCA6NCL1 334 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms