RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 SEPT4O43236 478 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 ASGR1P07306 291 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 FGFR1P11362 822 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 ETS1P14921 441 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 KCNE1P15382 129 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 SDC4P31431 198 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 CDH6P55285 790 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 SNX16P57768 344 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 LILRA4P59901 499 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 GPS1Q13098 491 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 RAB6CQ53S08 254 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 THEMIS2Q5TEJ8 643 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 TAB3Q8N5C8 712 aaPredicted RBP14.75□□□□□ -0.05
LIMD1-202ENST00000440097 GLIS1Q8NBF1 620 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 ACTL9Q8TC94 416 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 SLC2A14Q8TDB8 520 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 WNT8BQ93098 351 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 NAF1Q96HR8 494 aaKnown RBP14.75□□□□□ -0.05
LIMD1-202ENST00000440097 DDX23Q9BUQ8 820 aaKnown RBP14.75□□□□□ -0.05
LIMD1-202ENST00000440097 RAB6CQ9H0N0 254 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 C10orf88Q9H8K7 445 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 NKX1-2Q9UD57 310 aaPredicted RBP14.75□□□□□ -0.05
LIMD1-202ENST00000440097 PRKAG3Q9UGI9 489 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 C2CD4BA6NLJ0 364 aa14.74□□□□□ -0.05
LIMD1-202ENST00000440097 ACAT1P24752 427 aaKnown RBP14.74□□□□□ -0.05
LIMD1-202ENST00000440097 IVDP26440 423 aa14.74□□□□□ -0.05
LIMD1-202ENST00000440097 TM4SF4P48230 202 aa14.74□□□□□ -0.05
LIMD1-202ENST00000440097 OTUD4Q01804 1114 aaKnown RBP14.74□□□□□ -0.05
LIMD1-202ENST00000440097 CACNB2Q08289 660 aaPredicted RBP14.74□□□□□ -0.05
LIMD1-202ENST00000440097 FAM182AQ5T1J6 154 aa14.74□□□□□ -0.05
LIMD1-202ENST00000440097 HACE1Q8IYU2 909 aa14.74□□□□□ -0.05
LIMD1-202ENST00000440097 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.74□□□□□ -0.05
LIMD1-202ENST00000440097 KBTBD7Q8WVZ9 684 aa14.74□□□□□ -0.05
LIMD1-202ENST00000440097 GAD1Q99259 594 aa14.74□□□□□ -0.05
LIMD1-202ENST00000440097 CDC42EP4Q9H3Q1 356 aaKnown RBP14.74□□□□□ -0.05
LIMD1-202ENST00000440097 AAASQ9NRG9 546 aa14.74□□□□□ -0.05
LIMD1-202ENST00000440097 FAM105AQ9NUU6 356 aa14.74□□□□□ -0.05
LIMD1-202ENST00000440097 MGAT5Q09328 741 aa14.74□□□□□ -0.05
LIMD1-202ENST00000440097 KRT81Q14533 505 aa14.74□□□□□ -0.05
LIMD1-202ENST00000440097 BBOF1Q8ND07 529 aa14.74□□□□□ -0.05
LIMD1-202ENST00000440097 SLC35F5Q8WV83 523 aa14.74□□□□□ -0.05
LIMD1-202ENST00000440097 TRUB2O95900 331 aaKnown RBP14.73□□□□□ -0.05
LIMD1-202ENST00000440097 PRKAR2AP13861 404 aaKnown RBP14.73□□□□□ -0.05
LIMD1-202ENST00000440097 CCNB1P14635 433 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 CCND3P30281 292 aaPredicted RBP14.73□□□□□ -0.05
LIMD1-202ENST00000440097 BCAT1P54687 386 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 VCPP55072 806 aaKnown RBP14.73□□□□□ -0.05
LIMD1-202ENST00000440097 SLC6A3Q01959 620 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 CAV1Q03135 178 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 BST2Q10589 180 aaKnown RBP14.73□□□□□ -0.05
LIMD1-202ENST00000440097 ACAP1Q15027 740 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 CGB2Q6NT52 195 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 TRNP1Q6NT89 227 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 ANKLE1Q8NAG6 615 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 FAM172AQ8WUF8 416 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 CKAP2Q8WWK9 683 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 UTP4Q969X6 686 aaKnown RBP14.73□□□□□ -0.05
LIMD1-202ENST00000440097 TNIP3Q96KP6 325 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 ROPN1BQ9BZX4 212 aaPredicted RBP14.73□□□□□ -0.05
LIMD1-202ENST00000440097 ROPN1Q9HAT0 212 aaPredicted RBP14.73□□□□□ -0.05
LIMD1-202ENST00000440097 ETNK1Q9HBU6 452 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 CTNNAL1Q9UBT7 734 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 TMEM88BA6NKF7 163 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 CYB561D2O14569 222 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 PTGESO14684 152 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 PAPSS1O43252 624 aaPredicted RBP14.73□□□□□ -0.05
LIMD1-202ENST00000440097 MMRN1Q13201 1228 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 KCNA10Q16322 511 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 OLFML1Q6UWY5 402 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 CLEC4CQ8WTT0 213 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 RSAD2Q8WXG1 361 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 PEBP4Q96S96 227 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 PLCD4Q9BRC7 762 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 C3orf70A6NLC5 250 aaPredicted RBP14.73□□□□□ -0.05
LIMD1-202ENST00000440097 WFS1O76024 890 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 CHRNA1P02708 482 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 HOXC8P31273 242 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 AFF1P51825 1210 aaKnown RBP14.73□□□□□ -0.05
LIMD1-202ENST00000440097 MPP2Q14168 576 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 KYNUQ16719 465 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 CCDC142Q17RM4 750 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 PPP6R3Q5H9R7 873 aaPredicted RBP14.73□□□□□ -0.05
LIMD1-202ENST00000440097 ALLCQ8N6M5 410 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 FAM149B1Q96BN6 582 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 TGS1Q96RS0 853 aaKnown RBP14.73□□□□□ -0.05
LIMD1-202ENST00000440097 TSPYL2Q9H2G4 693 aaPredicted RBP14.73□□□□□ -0.05
LIMD1-202ENST00000440097 GPATCH2LQ9NWQ4 482 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 GDAP2Q9NXN4 497 aa14.73□□□□□ -0.05
LIMD1-202ENST00000440097 KLHL33A6NCF5 533 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 AP1G2O75843 785 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 ALDH1A1P00352 501 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 SETSIPP0DME0 302 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 KLRC2P26717 231 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 PCK1P35558 622 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 CTCFP49711 727 aaPredicted RBP14.72□□□□□ -0.05
LIMD1-202ENST00000440097 CCDC14Q49A88 953 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 HP1BP3Q5SSJ5 553 aaPredicted RBP14.72□□□□□ -0.05
LIMD1-202ENST00000440097 WSCD1Q658N2 575 aa14.72□□□□□ -0.05
LIMD1-202ENST00000440097 TRMT10CQ7L0Y3 403 aaKnown RBP14.72□□□□□ -0.05
LIMD1-202ENST00000440097 TMEM110Q86TL2 294 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms