RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 GCAP28676 217 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 RGS7P49802 495 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 MMRN1Q13201 1228 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 C15orf59Q2T9L4 293 aaPredicted RBP14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 FBXO47Q5MNV8 452 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 ANKRD22Q5VYY1 191 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 TTC39CQ8N584 583 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 FITM2Q8N6M3 262 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 MAB21L3Q8N8X9 362 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 KCNV2Q8TDN2 545 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 PXYLP1Q8TE99 480 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 PEBP4Q96S96 227 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 FAM124BQ9H5Z6 455 aaPredicted RBP14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 KIF9Q9HAQ2 790 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 FAM105AQ9NUU6 356 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 WDR35Q9P2L0 1181 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 TSPAN16Q9UKR8 245 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 XPOTO43592 962 aaKnown RBP14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 INHAP05111 366 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 TRNP1Q6NT89 227 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 BBS12Q6ZW61 710 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 RSAD2Q8WXG1 361 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 KLHL29Q96CT2 875 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 RMDN2Q96LZ7 410 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 FOXP3Q9BZS1 431 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 NSRP1Q9H0G5 558 aaKnown RBP14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 EURLQ9NYK6 297 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 NOD1Q9Y239 953 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 PTGESO14684 152 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 SPTLC1O15269 473 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 SPAG7O75391 227 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 RPLP2P05387 115 aaKnown RBP14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 ABHD2P08910 425 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 STX2P32856 288 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 RIPK1Q13546 671 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 HIF1AQ16665 826 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 SOWAHAQ2M3V2 549 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 SYCP2LQ5T4T6 812 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 OR6B2Q6IFH4 312 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 NPNTQ6UXI9 565 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 CENPUQ71F23 418 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 UNC45BQ8IWX7 931 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 FAM71DQ8N9W8 422 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 MCRS1Q96EZ8 462 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 ZNF560Q96MR9 790 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 PAIP2Q9BPZ3 127 aaKnown RBP14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 FAM167BQ9BTA0 163 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 SHOC2Q9UQ13 582 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 NME7Q9Y5B8 376 aa14.46□□□□□ -0.09
PTCHD3-201ENST00000438700 EME2A4GXA9 379 aaPredicted RBP14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 GPR182O15218 404 aa14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 OAS1P00973 400 aaKnown RBP14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 CD52P31358 61 aa14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 ATP11AP98196 1134 aa14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 GALNTL6Q49A17 601 aa14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 FAM183BPQ6ZVS7 135 aa14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 ACOT1Q86TX2 421 aa14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 ZC3H18Q86VM9 953 aaKnown RBP14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 CPT1BQ92523 772 aa14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 LPPQ93052 612 aa14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 TGS1Q96RS0 853 aaKnown RBP14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 TSPAN18Q96SJ8 248 aa14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 CHST12Q9NRB3 414 aa14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 FAM49BQ9NUQ9 324 aa14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 NKIRAS1Q9NYS0 192 aa14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 USP15Q9Y4E8 981 aaPredicted RBP14.46□□□□□ -0.1
PTCHD3-201ENST00000438700 TCRBV7S3A2A0A539 114 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 KPNA7A9QM74 516 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 CABYRO75952 493 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 TRUB2O95900 331 aaKnown RBP14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 GNRH1P01148 92 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 PDGFRAP16234 1089 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 MLH1P40692 756 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 GABRB2P47870 512 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 CDH6P55285 790 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 RNASELQ05823 741 aaKnown RBP14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 MGAT5Q09328 741 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 MSS51Q4VC12 460 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 FNBP1LQ5T0N5 605 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 CEP128Q6ZU80 1094 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 OR6B3Q8NGW1 331 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 SPATA18Q8TC71 538 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 MAML1Q92585 1016 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 TTC25Q96NG3 672 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 PADI3Q9ULW8 664 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 FARP1Q9Y4F1 1045 aaPredicted RBP14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 CFAP73A6NFT4 308 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 HCRTO43612 131 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 ALADP13716 330 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 KRT15P19012 456 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 RPL22P35268 128 aaKnown RBP14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 TAF6P49848 677 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 SLC8A3P57103 927 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 EIF3EP60228 445 aaKnown RBP14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 BASP1P80723 227 aaKnown RBP14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 PTK7Q13308 1070 aa14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 EFTUD2Q15029 972 aaKnown RBP eCLIP14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 PKN2Q16513 984 aaKnown RBP14.45□□□□□ -0.1
PTCHD3-201ENST00000438700 GOLGA7BQ2TAP0 167 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms