RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TULP2O00295 520 aa25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 CYP17A1P05093 508 aa25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 IRF1P10914 325 aa25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 BRD2P25440 801 aaKnown RBP25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 EEF1GP26641 437 aaKnown RBP25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 PON1P27169 355 aa25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 GALK1P51570 392 aa25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 KCNJ12Q14500 433 aa25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 DHCR24Q15392 516 aa25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 FBXO43Q4G163 708 aa25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 HSP90AA4PQ58FG1 418 aa25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 PM20D1Q6GTS8 502 aa25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 ALYREFQ86V81 257 aaKnown RBP25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 ULBP1Q9BZM6 244 aa25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 SCAMP3O14828 347 aaKnown RBP25.97■■□□□ 1.75
RAPGEF1-206ENST00000438647 CXCL12P48061 93 aa25.97■■□□□ 1.75
RAPGEF1-206ENST00000438647 YWHAGP61981 247 aaKnown RBP eCLIP25.97■■□□□ 1.75
RAPGEF1-206ENST00000438647 ADIGQ0VDE8 80 aa25.97■■□□□ 1.75
RAPGEF1-206ENST00000438647 STX1AQ16623 288 aa25.97■■□□□ 1.75
RAPGEF1-206ENST00000438647 FSTL4Q6MZW2 842 aa25.97■■□□□ 1.75
RAPGEF1-206ENST00000438647 CCDC26Q8TAB7 109 aa25.97■■□□□ 1.75
RAPGEF1-206ENST00000438647 SLC35F5Q8WV83 523 aa25.97■■□□□ 1.75
RAPGEF1-206ENST00000438647 FAM126AQ9BYI3 521 aaPredicted RBP25.97■■□□□ 1.75
RAPGEF1-206ENST00000438647 SEMA4AQ9H3S1 761 aa25.97■■□□□ 1.75
RAPGEF1-206ENST00000438647 CNGB3Q9NQW8 809 aa25.97■■□□□ 1.75
RAPGEF1-206ENST00000438647 SAMSN1Q9NSI8 373 aaKnown RBP25.97■■□□□ 1.75
RAPGEF1-206ENST00000438647 VPS13AQ96RL7 3174 aa25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 PES1O00541 588 aaKnown RBP25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 MED7O43513 233 aa25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 COG7P83436 770 aa25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 GAS6Q14393 721 aa25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 MEA1Q16626 185 aa25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 TCP11X2Q5H9J9 407 aa25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 Q6ZS52 159 aa25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 HTR3DQ70Z44 454 aa25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 RSRC2Q7L4I2 434 aaKnown RBP25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 SCML4Q8N228 414 aa25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 SECISBP2LQ93073 1101 aaKnown RBP25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 NKD2Q969F2 451 aaPredicted RBP25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 HSFY1Q96LI6 401 aa25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 ZSWIM1Q9BR11 485 aa25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 NUDT5Q9UKK9 219 aa25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 DMDP11532 3685 aa25.96■■□□□ 1.75
RAPGEF1-206ENST00000438647 ATG13O75143 517 aa25.95■■□□□ 1.74
RAPGEF1-206ENST00000438647 EIF2DP41214 584 aaKnown RBP25.95■■□□□ 1.74
RAPGEF1-206ENST00000438647 NRLP54845 237 aa25.95■■□□□ 1.74
RAPGEF1-206ENST00000438647 ARHGAP44Q17R89 818 aa25.95■■□□□ 1.74
RAPGEF1-206ENST00000438647 MIIPQ5JXC2 388 aa25.95■■□□□ 1.74
RAPGEF1-206ENST00000438647 BTBD8Q5XKL5 378 aa25.95■■□□□ 1.74
RAPGEF1-206ENST00000438647 GJB7Q6PEY0 223 aa25.95■■□□□ 1.74
RAPGEF1-206ENST00000438647 RHBDF2Q6PJF5 856 aa25.95■■□□□ 1.74
RAPGEF1-206ENST00000438647 BBS7Q8IWZ6 715 aa25.95■■□□□ 1.74
RAPGEF1-206ENST00000438647 OLA1Q9NTK5 396 aaKnown RBP25.95■■□□□ 1.74
RAPGEF1-206ENST00000438647 STRIP2Q9ULQ0 834 aa25.95■■□□□ 1.74
RAPGEF1-206ENST00000438647 PCDHGA2Q9Y5H1 932 aa25.95■■□□□ 1.74
RAPGEF1-206ENST00000438647 MDM4O15151 490 aa25.94■■□□□ 1.74
RAPGEF1-206ENST00000438647 PAPSS2O95340 614 aaPredicted RBP25.94■■□□□ 1.74
RAPGEF1-206ENST00000438647 EGFP01133 1207 aa25.94■■□□□ 1.74
RAPGEF1-206ENST00000438647 ADH5P11766 374 aa25.94■■□□□ 1.74
RAPGEF1-206ENST00000438647 GNA15P30679 374 aa25.94■■□□□ 1.74
RAPGEF1-206ENST00000438647 USP8P40818 1118 aa25.94■■□□□ 1.74
RAPGEF1-206ENST00000438647 GAD2Q05329 585 aa25.94■■□□□ 1.74
RAPGEF1-206ENST00000438647 PMF1Q6P1K2 205 aa25.94■■□□□ 1.74
RAPGEF1-206ENST00000438647 MIB1Q86YT6 1006 aa25.94■■□□□ 1.74
RAPGEF1-206ENST00000438647 FBRSL1Q9HCM7 1045 aaKnown RBP25.94■■□□□ 1.74
RAPGEF1-206ENST00000438647 ZSCAN32Q9NX65 697 aa25.94■■□□□ 1.74
RAPGEF1-206ENST00000438647 RASAL2Q9UJF2 1139 aa25.94■■□□□ 1.74
RAPGEF1-206ENST00000438647 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.93■■□□□ 1.74
RAPGEF1-206ENST00000438647 LETM1O95202 739 aaPredicted RBP25.93■■□□□ 1.74
RAPGEF1-206ENST00000438647 TPM2P07951 284 aa25.93■■□□□ 1.74
RAPGEF1-206ENST00000438647 LCP1P13796 627 aa25.93■■□□□ 1.74
RAPGEF1-206ENST00000438647 OPRD1P41143 372 aa25.93■■□□□ 1.74
RAPGEF1-206ENST00000438647 RGS7P49802 495 aa25.93■■□□□ 1.74
RAPGEF1-206ENST00000438647 EFEMP1Q12805 493 aa25.93■■□□□ 1.74
RAPGEF1-206ENST00000438647 LY6G5CQ5SRR4 150 aa25.93■■□□□ 1.74
RAPGEF1-206ENST00000438647 ATRIPQ8WXE1 791 aa25.93■■□□□ 1.74
RAPGEF1-206ENST00000438647 SHC3Q92529 594 aa25.93■■□□□ 1.74
RAPGEF1-206ENST00000438647 SPHK2Q9NRA0 654 aa25.93■■□□□ 1.74
RAPGEF1-206ENST00000438647 MARCH2Q9P0N8 246 aa25.93■■□□□ 1.74
RAPGEF1-206ENST00000438647 ZNF510Q9Y2H8 683 aa25.93■■□□□ 1.74
RAPGEF1-206ENST00000438647 R4GN57 208 aa25.93■■□□□ 1.74
RAPGEF1-206ENST00000438647 THAP12O43422 761 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 GREM1O60565 184 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 RNF40O75150 1001 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 FBXO21O94952 628 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 CALCAP01258 141 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 DAOAP59103 153 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 SATB1Q01826 763 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 GAB4Q2WGN9 574 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 NAIF1Q69YI7 327 aaPredicted RBP25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 TSSK4Q6SA08 328 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 RNF139Q8WU17 664 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 ZNF606Q8WXB4 792 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 IRGQQ8WZA9 623 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 NELL1Q92832 810 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 WBP2Q969T9 261 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 DCLK3Q9C098 648 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 ABCC13Q9NSE7 274 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 DNAJC12Q9UKB3 198 aa25.92■■□□□ 1.74
RAPGEF1-206ENST00000438647 USP34Q70CQ2 3546 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms