RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 TFE3P19532 575 aaPredicted RBP12.64□□□□□ -0.39
CLDN4-203ENST00000435050 BDNFP23560 247 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 AXLP30530 894 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 LILRA4P59901 499 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 PDE1BQ01064 536 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 TSPY1Q01534 308 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 SPARCL1Q14515 664 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 CCDC14Q49A88 953 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 KCNT2Q6UVM3 1135 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 POLNQ7Z5Q5 900 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 DEPDC1BQ8WUY9 529 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 PGBD4Q96DM1 585 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 ABI2Q9NYB9 513 aaPredicted RBP12.64□□□□□ -0.39
CLDN4-203ENST00000435050 PAK5Q9P286 719 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 C2CD4BA6NLJ0 364 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 GPR182O15218 404 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 SPTLC1O15269 473 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
CLDN4-203ENST00000435050 STIP1P31948 543 aaKnown RBP12.64□□□□□ -0.39
CLDN4-203ENST00000435050 YWHAZP63104 245 aaKnown RBP12.64□□□□□ -0.39
CLDN4-203ENST00000435050 SOX4Q06945 474 aaPredicted RBP12.64□□□□□ -0.39
CLDN4-203ENST00000435050 DPYSL3Q14195 570 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 ARL13BQ3SXY8 428 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 SPOUT1Q5T280 376 aaKnown RBP12.64□□□□□ -0.39
CLDN4-203ENST00000435050 PDZD4Q76G19 769 aaPredicted RBP12.64□□□□□ -0.39
CLDN4-203ENST00000435050 RNF139Q8WU17 664 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 FAM129AQ9BZQ8 928 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 ADAMTS10Q9H324 1103 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 CCDC195A0A1B0GUA6 201 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 ATP9BO43861 1147 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 FGFR1P11362 822 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 GOT1P17174 413 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 CLCNKBP51801 687 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 GBE1Q04446 702 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 TRIM32Q13049 653 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 TAF12Q16514 161 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 TADA2BQ86TJ2 420 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 FAM228AQ86W67 206 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 RASAL3Q86YV0 1011 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 THEM5Q8N1Q8 247 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 PEBP4Q96S96 227 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 APOL2Q9BQE5 337 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 GABRQQ9UN88 632 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 ASGR1P07306 291 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 SETSIPP0DME0 302 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 CYP3A5P20815 502 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 PRKCZQ05513 592 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 KLF1Q13351 362 aaPredicted RBP12.63□□□□□ -0.39
CLDN4-203ENST00000435050 PDK2Q15119 407 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 KLHL38Q2WGJ6 581 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 ANKRD20A8PQ5CZ79 823 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 FYB2Q5VWT5 728 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 UNC93AQ86WB7 457 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 MCRS1Q96EZ8 462 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 GLT1D1Q96MS3 346 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 PCDH18Q9HCL0 1135 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 PRM3Q9NNZ6 103 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 TMPRSS4Q9NRS4 437 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 PSMC3IPQ9P2W1 217 aaPredicted RBP12.63□□□□□ -0.39
CLDN4-203ENST00000435050 DDX20Q9UHI6 824 aaKnown RBP12.63□□□□□ -0.39
CLDN4-203ENST00000435050 SLC45A1Q9Y2W3 748 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 GRIN2DO15399 1336 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 FAM47DPA6NHR8 397 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 ALDH3A1P30838 453 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 PGLYRP2Q96PD5 576 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 CYTH2Q99418 400 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 SHOC2Q9UQ13 582 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 KBTBD13C9JR72 458 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 DFFAO00273 331 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 TRAPPC3O43617 180 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 GPR32O75388 356 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 ZNF865P0CJ78 1059 aaPredicted RBP12.63□□□□□ -0.39
CLDN4-203ENST00000435050 PCSK1P29120 753 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 EPHB2P29323 1055 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 CRADDP78560 199 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 SLC25A11Q02978 314 aaKnown RBP12.63□□□□□ -0.39
CLDN4-203ENST00000435050 FBXW10Q5XX13 1052 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 CYP4X1Q8N118 509 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 KCNK16Q96T55 309 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 PAFAH2Q99487 392 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 BAIAP2L1Q9UHR4 511 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 LRFN2Q9ULH4 789 aa12.63□□□□□ -0.39
CLDN4-203ENST00000435050 IQANK1A0A1B0GTG1 560 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 TCRBV7S3A2A0A539 114 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 ITGAVP06756 1048 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 HMBSP08397 361 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 PTK7Q13308 1070 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 HIBCHQ6NVY1 386 aaPredicted RBP12.62□□□□□ -0.39
CLDN4-203ENST00000435050 SPATA2LQ8IUW3 424 aaPredicted RBP12.62□□□□□ -0.39
CLDN4-203ENST00000435050 SEC14L1Q92503 715 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 LGMNQ99538 433 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 NCAPGQ9BPX3 1015 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 DRG1Q9Y295 367 aaKnown RBP12.62□□□□□ -0.39
CLDN4-203ENST00000435050 UPP2O95045 317 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 NPR3P17342 541 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 BMPR2Q13873 1038 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 BTBD8Q5XKL5 378 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 GDF6Q6KF10 455 aaPredicted RBP12.62□□□□□ -0.39
CLDN4-203ENST00000435050 GLB1LQ6UWU2 654 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 CELF6Q96J87 481 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms