RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 ID2Q02363 134 aa5.63□□□□□ -1.51
PTPN4-204ENST00000431283 STK3Q13188 491 aa5.63□□□□□ -1.51
PTPN4-204ENST00000431283 ARHGEF7Q14155 803 aa5.63□□□□□ -1.51
PTPN4-204ENST00000431283 C10orf25Q5T742 122 aa5.63□□□□□ -1.51
PTPN4-204ENST00000431283 ZDHHC24Q6UX98 284 aa5.63□□□□□ -1.51
PTPN4-204ENST00000431283 MAP4K1Q92918 833 aa5.63□□□□□ -1.51
PTPN4-204ENST00000431283 VPS50Q96JG6 964 aa5.63□□□□□ -1.51
PTPN4-204ENST00000431283 ZBTB45Q96K62 511 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-204ENST00000431283 ZCWPW1Q9H0M4 648 aa5.63□□□□□ -1.51
PTPN4-204ENST00000431283 TMEM60Q9H2L4 133 aa5.63□□□□□ -1.51
PTPN4-204ENST00000431283 FOXP1Q9H334 677 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-204ENST00000431283 FAM204AQ9H8W3 233 aa5.63□□□□□ -1.51
PTPN4-204ENST00000431283 NKX1-2Q9UD57 310 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-204ENST00000431283 AFF4Q9UHB7 1163 aaKnown RBP5.63□□□□□ -1.51
PTPN4-204ENST00000431283 TRIM43BA6NCK2 446 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 ISM1B1AKI9 464 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 H3BNC9 293 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 EXOC5O00471 708 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 RRP9O43818 475 aaKnown RBP5.62□□□□□ -1.51
PTPN4-204ENST00000431283 SNX2O60749 519 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 APEHP13798 732 aaKnown RBP5.62□□□□□ -1.51
PTPN4-204ENST00000431283 PRF1P14222 555 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 SLC29A2Q14542 456 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 AWAT1Q58HT5 328 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 OVCH2Q7RTZ1 564 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 KCTD20Q7Z5Y7 419 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 ANKRD13BQ86YJ7 626 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 LIX1LQ8IVB5 337 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 ZNF398Q8TD17 642 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 PNISRQ8TF01 805 aaKnown RBP5.62□□□□□ -1.51
PTPN4-204ENST00000431283 TRIM43Q96BQ3 446 aaPredicted RBP5.62□□□□□ -1.51
PTPN4-204ENST00000431283 ZNF668Q96K58 619 aaPredicted RBP5.62□□□□□ -1.51
PTPN4-204ENST00000431283 ZC3H10Q96K80 434 aaKnown RBP5.62□□□□□ -1.51
PTPN4-204ENST00000431283 SIGLEC11Q96RL6 698 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 ATP6V0A4Q9HBG4 840 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 POT1Q9NUX5 634 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 DNMT3BQ9UBC3 853 aaKnown RBP5.62□□□□□ -1.51
PTPN4-204ENST00000431283 CPNE7Q9UBL6 633 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 UHRF1BP1LA0JNW5 1464 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 TEX14Q8IWB6 1497 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 CUL7Q14999 1698 aa5.62□□□□□ -1.51
PTPN4-204ENST00000431283 AQP7P3A6NL99 342 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 RAB27BO00194 218 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 SPRY2O43597 315 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 INMTO95050 263 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 HGFP14210 728 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 KRTAP10-9P60411 292 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 RPS13P62277 151 aaKnown RBP5.61□□□□□ -1.51
PTPN4-204ENST00000431283 RAPGEF1Q13905 1077 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 CNN3Q15417 329 aaKnown RBP5.61□□□□□ -1.51
PTPN4-204ENST00000431283 TWIST1Q15672 202 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 ST3GAL2Q16842 350 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 MINDY4Q4G0A6 757 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 TMTC4Q5T4D3 741 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 CXorf57Q6NSI4 855 aaKnown RBP5.61□□□□□ -1.51
PTPN4-204ENST00000431283 IRF2BP2Q7Z5L9 587 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 YAF2Q8IY57 180 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 SAMD14Q8IZD0 417 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-204ENST00000431283 IPCEF1Q8WWN9 437 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-204ENST00000431283 MAML1Q92585 1016 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 OGDHLQ9ULD0 1010 aa5.61□□□□□ -1.51
PTPN4-204ENST00000431283 ADGRL1O94910 1474 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 ZMYM2Q9UBW7 1377 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 USP19O94966 1318 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 CYP19A1P11511 503 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-204ENST00000431283 TPH1P17752 444 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 HOXD9P28356 352 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-204ENST00000431283 CACNB3P54284 484 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 TIAL1Q01085 375 aaKnown RBP eCLIP5.6□□□□□ -1.51
PTPN4-204ENST00000431283 CFHR3Q02985 330 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 CNGA2Q16280 664 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 PFKFB3Q16875 520 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-204ENST00000431283 SLC9C1Q4G0N8 1177 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 MICU3Q86XE3 530 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 CHPFQ8IZ52 775 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 HIC2Q96JB3 615 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 KRTAP1-5Q9BYS1 174 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 DHX36Q9H2U1 1008 aaKnown RBP5.6□□□□□ -1.51
PTPN4-204ENST00000431283 FAM83DQ9H4H8 585 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 USP29Q9HBJ7 922 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 C1orf112Q9NSG2 853 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 STEAP1Q9UHE8 339 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 ITGB1BP2Q9UKP3 347 aa5.6□□□□□ -1.51
PTPN4-204ENST00000431283 GLI2P10070 1586 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 IQGAP2Q13576 1575 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 EPRSP07814 1512 aaKnown RBP5.59□□□□□ -1.51
PTPN4-204ENST00000431283 RAPGEF2Q9Y4G8 1499 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.59□□□□□ -1.51
PTPN4-204ENST00000431283 FAM90A10PA6NDY2 464 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 H3BNX3 289 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 CLIC1O00299 241 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 ACVR2AP27037 513 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 TACR3P29371 465 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 ME1P48163 572 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 CPT1AP50416 773 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 TXNL4AP83876 142 aaKnown RBP5.59□□□□□ -1.51
PTPN4-204ENST00000431283 MFSD13AQ14CX5 517 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 ARHGAP29Q52LW3 1261 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 MZT2AQ6P582 158 aa5.59□□□□□ -1.51
PTPN4-204ENST00000431283 PIM3Q86V86 326 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms