RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 ENOSF1Q7L5Y1 443 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 TTC30AQ86WT1 665 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 AOPEPQ8N6M6 819 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 UBA3Q8TBC4 463 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 CSGALNACT1Q8TDX6 532 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 TFAP2BQ92481 460 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 FAM3CQ92520 227 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 ZFYVE19Q96K21 471 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 FAM81BQ96LP2 452 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 VPS16Q9H269 839 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 LMAN1LQ9HAT1 526 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 PNPLA8Q9NP80 782 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 O00370 1275 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 CYP26A1O43174 497 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 LETM1O95202 739 aaPredicted RBP16.01■□□□□ 0.15
PTCD1-204ENST00000430982 PFKLP17858 780 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 HOXA6P31267 233 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 ZNF132P52740 706 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 PDE4CQ08493 712 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 ARHGAP29Q52LW3 1261 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 HECTD3Q5T447 861 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 CC2D1AQ6P1N0 951 aaPredicted RBP16.01■□□□□ 0.15
PTCD1-204ENST00000430982 PIGZQ86VD9 579 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 LONP2Q86WA8 852 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 SPEM1Q8N4L4 309 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 ANKRD20A12PQ8NF67 263 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 SH3RF2Q8TEC5 729 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 LSM14BQ9BX40 385 aaKnown RBP16.01■□□□□ 0.15
PTCD1-204ENST00000430982 SIX2Q9NPC8 291 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 SMPD4Q9NXE4 827 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 DNAJC12Q9UKB3 198 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 SCML2Q9UQR0 700 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 PIAS3Q9Y6X2 628 aa16.01■□□□□ 0.15
PTCD1-204ENST00000430982 SYCE3A1L190 88 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 FAM92AA1XBS5 289 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 CHURC1-FNTBB4DL54 471 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 M0QYV0 167 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 OAS1P00973 400 aaKnown RBP16■□□□□ 0.15
PTCD1-204ENST00000430982 PROS1P07225 676 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 MBL2P11226 248 aaPredicted RBP16■□□□□ 0.15
PTCD1-204ENST00000430982 CDK11BP21127 795 aaKnown RBP16■□□□□ 0.15
PTCD1-204ENST00000430982 FNTBP49356 437 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 KIF11P52732 1056 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 PLCB2Q00722 1185 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 BST2Q10589 180 aaKnown RBP16■□□□□ 0.15
PTCD1-204ENST00000430982 SRSF5Q13243 272 aaKnown RBP16■□□□□ 0.15
PTCD1-204ENST00000430982 COL9A2Q14055 689 aaPredicted RBP16■□□□□ 0.15
PTCD1-204ENST00000430982 MTF1Q14872 753 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 NCAPHQ15003 741 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 LCLAT1Q6UWP7 414 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16■□□□□ 0.15
PTCD1-204ENST00000430982 TTC8Q8TAM2 541 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 RIN3Q8TB24 985 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 ZSWIM1Q9BR11 485 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 UBXN6Q9BZV1 441 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 NACA2Q9H009 215 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 RNF38Q9H0F5 515 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 CCSER2Q9H7U1 834 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 TLR8Q9NR97 1041 aaKnown RBP16■□□□□ 0.15
PTCD1-204ENST00000430982 GKN1Q9NS71 199 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 ARHGAP26Q9UNA1 814 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 CPQQ9Y646 472 aa16■□□□□ 0.15
PTCD1-204ENST00000430982 TULP2O00295 520 aa15.99■□□□□ 0.15
PTCD1-204ENST00000430982 XPO1O14980 1071 aaKnown RBP15.99■□□□□ 0.15
PTCD1-204ENST00000430982 ZDHHC11BP0C7U3 371 aa15.99■□□□□ 0.15
PTCD1-204ENST00000430982 SETSIPP0DME0 302 aa15.99■□□□□ 0.15
PTCD1-204ENST00000430982 PGFP49763 221 aa15.99■□□□□ 0.15
PTCD1-204ENST00000430982 KPNA1P52294 538 aaPredicted RBP15.99■□□□□ 0.15
PTCD1-204ENST00000430982 COPB1P53618 953 aaKnown RBP15.99■□□□□ 0.15
PTCD1-204ENST00000430982 SLC7A9P82251 487 aa15.99■□□□□ 0.15
PTCD1-204ENST00000430982 KCNMA1Q12791 1236 aa15.99■□□□□ 0.15
PTCD1-204ENST00000430982 USP4Q13107 963 aa15.99■□□□□ 0.15
PTCD1-204ENST00000430982 STILQ15468 1287 aa15.99■□□□□ 0.15
PTCD1-204ENST00000430982 ZNF77Q15935 545 aa15.99■□□□□ 0.15
PTCD1-204ENST00000430982 CNGA2Q16280 664 aa15.99■□□□□ 0.15
PTCD1-204ENST00000430982 FKBP15Q5T1M5 1219 aa15.99■□□□□ 0.15
PTCD1-204ENST00000430982 FAM160A2Q8N612 972 aaPredicted RBP15.99■□□□□ 0.15
PTCD1-204ENST00000430982 LRRC4Q9HBW1 653 aa15.99■□□□□ 0.15
PTCD1-204ENST00000430982 AJAP1Q9UKB5 411 aaPredicted RBP15.99■□□□□ 0.15
PTCD1-204ENST00000430982 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.99■□□□□ 0.15
PTCD1-204ENST00000430982 CNTN6Q9UQ52 1028 aa15.99■□□□□ 0.15
PTCD1-204ENST00000430982 FASNP49327 2511 aaKnown RBP15.98■□□□□ 0.15
PTCD1-204ENST00000430982 A0A1W2PQH9 124 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 SMTNL1A8MU46 457 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 LEFTY2O00292 366 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 COCHO43405 550 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 OLFM2O95897 454 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 RGS7P49802 495 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 TKTL1P51854 596 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 TNK2Q07912 1038 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 SNX30Q5VWJ9 437 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 TRIM68Q6AZZ1 485 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 IL31Q6EBC2 164 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 CCDC186Q7Z3E2 898 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 MSANTD3Q96H12 275 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 BPIFA3Q9BQP9 254 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 NMUR1Q9HB89 426 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 GTSE1Q9NYZ3 720 aa15.98■□□□□ 0.15
PTCD1-204ENST00000430982 LIMA1Q9UHB6 759 aaKnown RBP15.98■□□□□ 0.15
PTCD1-204ENST00000430982 NAGPAQ9UK23 515 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms