RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 UBL7Q96S82 380 aaPredicted RBP9.22□□□□□ -0.93
HDAC1-202ENST00000428704 HNRNPABQ99729 332 aaKnown RBP9.22□□□□□ -0.93
HDAC1-202ENST00000428704 MSTO1Q9BUK6 570 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 CARD6Q9BX69 1037 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 IRX2Q9BZI1 471 aaPredicted RBP9.22□□□□□ -0.93
HDAC1-202ENST00000428704 GANQ9H2C0 597 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 C8orf33Q9H7E9 229 aaPredicted RBP9.22□□□□□ -0.93
HDAC1-202ENST00000428704 PLEKHA5Q9HAU0 1116 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 FAM207AQ9NSI2 230 aaPredicted RBP9.22□□□□□ -0.93
HDAC1-202ENST00000428704 SLC8A2Q9UPR5 921 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 RAXQ9Y2V3 346 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 ATP8B3O60423 1300 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 TENM4Q6N022 2769 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 CELSR3Q9NYQ7 3312 aa9.21□□□□□ -0.93
HDAC1-202ENST00000428704 HECTD1Q9ULT8 2610 aa9.21□□□□□ -0.93
HDAC1-202ENST00000428704 A0A0U1RQJ8 604 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 SLC38A8A6NNN8 435 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 PMM2O15305 246 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 C1QL1O75973 258 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 F12P00748 615 aaPredicted RBP9.21□□□□□ -0.94
HDAC1-202ENST00000428704 TUBBP07437 444 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 NFICP08651 508 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 LRPAP1P30533 357 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 GBP1P32455 592 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 RPL9P32969 192 aaKnown RBP9.21□□□□□ -0.94
HDAC1-202ENST00000428704 ABCD1P33897 745 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 PRKCIP41743 596 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 MATR3P43243 847 aaKnown RBP eCLIP9.21□□□□□ -0.94
HDAC1-202ENST00000428704 ACOT2P49753 483 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 KIF11P52732 1056 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 MLLT6P55198 1093 aaPredicted RBP9.21□□□□□ -0.94
HDAC1-202ENST00000428704 ENPEPQ07075 957 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 KIF5AQ12840 1032 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 NAA30Q147X3 362 aaPredicted RBP9.21□□□□□ -0.94
HDAC1-202ENST00000428704 ERCC6LQ2NKX8 1250 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 CCDC122Q5T0U0 273 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 C10orf76Q5T2E6 689 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 SFMBT2Q5VUG0 894 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 RRAGAQ7L523 313 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 HS2ST1Q7LGA3 356 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 FMNL3Q8IVF7 1028 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 YAF2Q8IY57 180 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 SYNPOQ8N3V7 929 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 RNF10Q8N5U6 811 aaKnown RBP9.21□□□□□ -0.94
HDAC1-202ENST00000428704 SLC35C1Q96A29 364 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 JAKMIP2Q96AA8 810 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 SUSD3Q96L08 255 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 ASB16Q96NS5 453 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 KALRNO60229 2985 aa9.21□□□□□ -0.94
HDAC1-202ENST00000428704 BTNL10A8MVZ5 291 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 SPECC1L-ADORA2AF8WAN1 911 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 J3QKU1 62 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 NRG2O14511 850 aaPredicted RBP9.2□□□□□ -0.94
HDAC1-202ENST00000428704 ZNF197O14709 1029 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 P4HA2O15460 535 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 ATP8B1O43520 1251 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 GFPT2O94808 682 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 ABL1P00519 1130 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 PTPN2P17706 415 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 CYP3A5P20815 502 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 PON1P27169 355 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 OR1D2P34982 312 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 EIF4A3P38919 411 aaKnown RBP9.2□□□□□ -0.94
HDAC1-202ENST00000428704 VIPR2P41587 438 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 AARSP49588 968 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC1-202ENST00000428704 RAB33AQ14088 237 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 MRPL58Q14197 206 aaKnown RBP9.2□□□□□ -0.94
HDAC1-202ENST00000428704 PON2Q15165 354 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 KYAT1Q16773 422 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 EXOC3L4Q17RC7 722 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 WDR44Q5JSH3 913 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 KLHDC7AQ5VTJ3 777 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 JADE1Q6IE81 842 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 TXNDC11Q6PKC3 985 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 GBP6Q6ZN66 633 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 TRAPPC11Q7Z392 1133 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 KIAA1328Q86T90 577 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 EFCAB13Q8IY85 973 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 TRIM58Q8NG06 486 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 SMARCD2Q92925 531 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 LACRTQ9GZZ8 138 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 RPF1Q9H9Y2 349 aaKnown RBP9.2□□□□□ -0.94
HDAC1-202ENST00000428704 LUC7LQ9NQ29 371 aaKnown RBP9.2□□□□□ -0.94
HDAC1-202ENST00000428704 AVENQ9NQS1 362 aaPredicted RBP9.2□□□□□ -0.94
HDAC1-202ENST00000428704 AGPAT3Q9NRZ7 376 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 AGO2Q9UKV8 859 aaKnown RBP9.2□□□□□ -0.94
HDAC1-202ENST00000428704 UBQLN1Q9UMX0 589 aaKnown RBP9.2□□□□□ -0.94
HDAC1-202ENST00000428704 GUCA1BQ9UMX6 200 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 PCDHA13Q9Y5I0 950 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 BACE2Q9Y5Z0 518 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 CDY1Q9Y6F8 540 aa9.2□□□□□ -0.94
HDAC1-202ENST00000428704 ZNF462Q96JM2 2506 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 WDR27A2RRH5 827 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 PATE3B3GLJ2 98 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 M0QZQ0 153 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 ARNTLO00327 626 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 SYN3O14994 580 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 DCLK1O15075 740 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 TRAPPC3O43617 180 aa9.19□□□□□ -0.94
HDAC1-202ENST00000428704 AKR1B10O60218 316 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms