RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 PCDHGC3Q9UN70 934 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 CNTN6Q9UQ52 1028 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 SCML2Q9UQR0 700 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 NUMBLQ9Y6R0 609 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 PDCD11Q14690 1871 aaKnown RBP7.34□□□□□ -1.23
CDC7-203ENST00000428239 TTC28Q96AY4 2481 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 TYW5A2RUC4 315 aaKnown RBP7.34□□□□□ -1.23
CDC7-203ENST00000428239 HEPACAM2A8MVW5 462 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 M0QYT0 321 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 ZNF263O14978 683 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 HSF2BPO75031 334 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 GJB6O95452 261 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 ERBB2P04626 1255 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 H2AFZP0C0S5 128 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 PDGFRAP16234 1089 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 GBP1P32455 592 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 MAGEA1P43355 309 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 NOMO3P69849 1222 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 KCNC3Q14003 757 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 TAF5Q15542 800 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 FAM78AQ5JUQ0 283 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 HFE2Q6ZVN8 426 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 H2AFVQ71UI9 128 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 MCEEQ96PE7 176 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 TRMT61BQ9BVS5 477 aaKnown RBP7.34□□□□□ -1.23
CDC7-203ENST00000428239 SIK2Q9H0K1 926 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 LHX5Q9H2C1 402 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 NMUR1Q9HB89 426 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 AIPL1Q9NZN9 384 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 NOCTQ9UK39 431 aaKnown RBP7.34□□□□□ -1.23
CDC7-203ENST00000428239 NAALADL1Q9UQQ1 740 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 NCOR1O75376 2440 aa7.34□□□□□ -1.23
CDC7-203ENST00000428239 PAPSS1O43252 624 aaPredicted RBP7.34□□□□□ -1.24
CDC7-203ENST00000428239 COCHO43405 550 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 DDX6P26196 483 aaKnown RBP eCLIP7.34□□□□□ -1.24
CDC7-203ENST00000428239 PBX1P40424 430 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 COG7P83436 770 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 SLC6A3Q01959 620 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 ARID5BQ14865 1188 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 ACAD10Q6JQN1 1059 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 PPP1R2P3Q6NXS1 205 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 PARM1Q6UWI2 310 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 TPGS1Q6ZTW0 290 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 IRF2BP2Q7Z5L9 587 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 ZNF354CQ86Y25 554 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 ADHFE1Q8IWW8 467 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 BPIFB1Q8TDL5 484 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 TRIM11Q96F44 468 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 TRMT2BQ96GJ1 504 aaKnown RBP7.34□□□□□ -1.24
CDC7-203ENST00000428239 SLC22A12Q96S37 553 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 PCDHB18PQ96TA0 734 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 POPDC2Q9HBU9 364 aa7.34□□□□□ -1.24
CDC7-203ENST00000428239 OLA1Q9NTK5 396 aaKnown RBP7.34□□□□□ -1.24
CDC7-203ENST00000428239 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.34□□□□□ -1.24
CDC7-203ENST00000428239 A0A087X0T9 212 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 RTN2O75298 545 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 RNF8O76064 485 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 F11P03951 625 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 FAM228BP0C875 321 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 RRM1P23921 792 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 PSMA2P25787 234 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 TBX4P57082 545 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 DEUP1Q05D60 604 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 TANGO2Q6ICL3 276 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.33□□□□□ -1.24
CDC7-203ENST00000428239 TMC8Q8IU68 726 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 CELF5Q8N6W0 485 aaKnown RBP7.33□□□□□ -1.24
CDC7-203ENST00000428239 CEP295NLQ96MC4 621 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 KCNK12Q9HB15 430 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 MRPL47Q9HD33 250 aaKnown RBP7.33□□□□□ -1.24
CDC7-203ENST00000428239 TAS2R14Q9NYV8 317 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 WDR35Q9P2L0 1181 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 IMPACTQ9P2X3 320 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 CYTH4Q9UIA0 394 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 WNT6Q9Y6F9 365 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 SOWAHDA6NJG2 315 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 TNFRSF10BO14763 440 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 PRAMEF12O95522 483 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 CHRNB2P17787 502 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 NR1H3Q13133 447 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 MTF1Q14872 753 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 TMTC1Q8IUR5 882 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 DENND1CQ8IV53 801 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 STK32AQ8WU08 396 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 KCTD13Q8WZ19 329 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 SYN2Q92777 582 aaPredicted RBP7.33□□□□□ -1.24
CDC7-203ENST00000428239 TRIM44Q96DX7 344 aaPredicted RBP7.33□□□□□ -1.24
CDC7-203ENST00000428239 TTYH3Q9C0H2 523 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 IL21Q9HBE4 155 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 DUS2Q9NX74 493 aaKnown RBP7.33□□□□□ -1.24
CDC7-203ENST00000428239 STIM2Q9P246 746 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 ARHGAP20Q9P2F6 1191 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 ZMYM5Q9UJ78 669 aa7.33□□□□□ -1.24
CDC7-203ENST00000428239 ZFP37Q9Y6Q3 630 aaPredicted RBP7.33□□□□□ -1.24
CDC7-203ENST00000428239 DDX3XO00571 662 aaKnown RBP eCLIP7.32□□□□□ -1.241e-6■□□□□ 9.7
CDC7-203ENST00000428239 TSPAN3O60637 253 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 TRUB2O95900 331 aaKnown RBP7.32□□□□□ -1.24
CDC7-203ENST00000428239 CYBBP04839 570 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 PSMC3P17980 439 aa7.32□□□□□ -1.24
CDC7-203ENST00000428239 NUMBP49757 651 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms