RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 PDCL3Q9H2J4 239 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 MFSD1Q9H3U5 465 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 HEBP1Q9NRV9 189 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 GKN1Q9NS71 199 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 CFAP97Q9P2B7 532 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 E5RJQ4 531 aa26.37■■□□□ 1.81
HERPUD2-205ENST00000427455 SART1O43290 800 aaKnown RBP26.37■■□□□ 1.81
HERPUD2-205ENST00000427455 PDGFBP01127 241 aaPredicted RBP26.37■■□□□ 1.81
HERPUD2-205ENST00000427455 IER5LQ5T953 404 aa26.37■■□□□ 1.81
HERPUD2-205ENST00000427455 TAF3Q5VWG9 929 aa26.37■■□□□ 1.81
HERPUD2-205ENST00000427455 BTBD8Q5XKL5 378 aa26.37■■□□□ 1.81
HERPUD2-205ENST00000427455 RSRC2Q7L4I2 434 aaKnown RBP26.37■■□□□ 1.81
HERPUD2-205ENST00000427455 TMEM110Q86TL2 294 aa26.37■■□□□ 1.81
HERPUD2-205ENST00000427455 WDTC1Q8N5D0 677 aa26.37■■□□□ 1.81
HERPUD2-205ENST00000427455 RNF214Q8ND24 703 aa26.37■■□□□ 1.81
HERPUD2-205ENST00000427455 MIS12Q9H081 205 aa26.37■■□□□ 1.81
HERPUD2-205ENST00000427455 NOCTQ9UK39 431 aaKnown RBP26.37■■□□□ 1.81
HERPUD2-205ENST00000427455 NUDT5Q9UKK9 219 aa26.37■■□□□ 1.81
HERPUD2-205ENST00000427455 MYO6Q9UM54 1294 aa26.37■■□□□ 1.81
HERPUD2-205ENST00000427455 LSM8O95777 96 aaKnown RBP26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 CDH5P33151 784 aaPredicted RBP26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 IFNAR2P48551 515 aa26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 GOLGA8FQ08AF8 430 aa26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 GOLGA8DPQ0D2H9 430 aa26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 BSPRYQ5W0U4 402 aa26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 FMNL3Q8IVF7 1028 aa26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 TMEM35BQ8NCS4 154 aa26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 CLEC4CQ8WTT0 213 aa26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 GOLGA1Q92805 767 aa26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 PPP1R13BQ96KQ4 1090 aa26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 KLF16Q9BXK1 252 aaPredicted RBP26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 ABCC13Q9NSE7 274 aa26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 OLA1Q9NTK5 396 aaKnown RBP26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 DUS2Q9NX74 493 aaKnown RBP26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 IFNKQ9P0W0 207 aa26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 WNT6Q9Y6F9 365 aa26.36■■□□□ 1.81
HERPUD2-205ENST00000427455 MDM4O15151 490 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 TPM3P06753 285 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 PBX1P40424 430 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 MLLT6P55198 1093 aaPredicted RBP26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 TNK2Q07912 1038 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 TRIM68Q6AZZ1 485 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 TPRG1Q6ZUI0 275 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 SCUBE3Q8IX30 993 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 FBXL6Q8N531 539 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 MSANTD3Q96H12 275 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 CPXM1Q96SM3 734 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 LRFN3Q9BTN0 628 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 TBC1D17Q9HA65 648 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 HPS4Q9NQG7 708 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 GTSE1Q9NYZ3 720 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 PIAS3Q9Y6X2 628 aa26.35■■□□□ 1.81
HERPUD2-205ENST00000427455 ZDBF2Q9HCK1 2354 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 E2F8A0AVK6 867 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 SLC9A3R1O14745 358 aaPredicted RBP26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 PAPSS1O43252 624 aaPredicted RBP26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 LTFP02788 710 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 MMEP08473 750 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 GLULP15104 373 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 SNX16P57768 344 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 STARD6P59095 220 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 CDR2Q01850 454 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 EFEMP1Q12805 493 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 ITPRIPL2Q3MIP1 535 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 FIGNQ5HY92 759 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 MIB1Q86YT6 1006 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 IPO4Q8TEX9 1081 aaKnown RBP26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 RNF139Q8WU17 664 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 SLC20A1Q8WUM9 679 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 BAP1Q92560 729 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 ATP2A3Q93084 1043 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 DDX23Q9BUQ8 820 aaKnown RBP26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 TTYH3Q9C0H2 523 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 EBF3Q9H4W6 596 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 RASAL2Q9UJF2 1139 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 SH3BP1Q9Y3L3 701 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 COL4A3Q01955 1670 aa26.34■■□□□ 1.81
HERPUD2-205ENST00000427455 CCDC172P0C7W6 258 aa26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 IRF1P10914 325 aa26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 KPNA1P52294 538 aaPredicted RBP26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 ARID5AQ03989 594 aa26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 RUNX3Q13761 415 aa26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 EML3Q32P44 896 aa26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 PTPN20Q4JDL3 420 aa26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 CWF19L1Q69YN2 538 aaKnown RBP26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 SUGP1Q8IWZ8 645 aaKnown RBP26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 CPA6Q8N4T0 437 aa26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 FLCNQ8NFG4 579 aa26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 EDEM1Q92611 657 aa26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 TRIM62Q9BVG3 475 aa26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 EDEM3Q9BZQ6 932 aa26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 C8orf33Q9H7E9 229 aaPredicted RBP26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 MARCH2Q9P0N8 246 aa26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 STRIP2Q9ULQ0 834 aa26.33■■□□□ 1.81
HERPUD2-205ENST00000427455 ARSAP15289 507 aa26.32■■□□□ 1.8
HERPUD2-205ENST00000427455 FERP16591 822 aa26.32■■□□□ 1.8
HERPUD2-205ENST00000427455 COG7P83436 770 aa26.32■■□□□ 1.8
HERPUD2-205ENST00000427455 C1orf228Q6PIY5 440 aa26.32■■□□□ 1.8
HERPUD2-205ENST00000427455 NUP58Q9BVL2 599 aa26.32■■□□□ 1.8
HERPUD2-205ENST00000427455 SYNCQ9H7C4 482 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms