RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 HEATR9A2RTY3 570 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 STX3Q13277 289 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 AGBL2Q5U5Z8 902 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 PAPD7Q5XG87 772 aaKnown RBP14.35□□□□□ -0.11
RPL28-202ENST00000426763 LZTR1Q8N653 840 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 C3orf20Q8ND61 904 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 ADGRE3Q9BY15 652 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 SYNDIG1Q9H7V2 258 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 ABCC13Q9NSE7 274 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 RNF19AQ9NV58 838 aa14.35□□□□□ -0.11
RPL28-202ENST00000426763 CICQ96RK0 1608 aaPredicted RBP14.35□□□□□ -0.11
RPL28-202ENST00000426763 CNGA2Q16280 664 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 CCDC33Q8N5R6 958 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 LPPQ93052 612 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 C18orf25Q96B23 403 aaPredicted RBP14.34□□□□□ -0.11
RPL28-202ENST00000426763 XPO6Q96QU8 1125 aaKnown RBP14.34□□□□□ -0.11
RPL28-202ENST00000426763 ULBP1Q9BZM6 244 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 BRD8Q9H0E9 1235 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 NT5MQ9NPB1 228 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 FAM105AQ9NUU6 356 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 NDE1Q9NXR1 346 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 SLC39A10Q9ULF5 831 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 GRID1Q9ULK0 1009 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 DLG5Q8TDM6 1919 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 FAM47DPA6NHR8 397 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 E5RJQ4 531 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 DDX3XO00571 662 aaKnown RBP eCLIP14.34□□□□□ -0.112e-58■□□□□ 10.3
RPL28-202ENST00000426763 B4GALT5O43286 388 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 CA12O43570 354 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 GJB1P08034 283 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 TNFSF9P41273 254 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 ZNF135P52742 658 aaPredicted RBP14.34□□□□□ -0.11
RPL28-202ENST00000426763 PREPLQ4J6C6 727 aaPredicted RBP14.34□□□□□ -0.11
RPL28-202ENST00000426763 NLRP14Q86W24 1093 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 LRRC40Q9H9A6 602 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 WHRNQ9P202 907 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 AHDC1Q5TGY3 1603 aaPredicted RBP14.34□□□□□ -0.11
RPL28-202ENST00000426763 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.34□□□□□ -0.11
RPL28-202ENST00000426763 ARHGAP10A1A4S6 786 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 ENDOD1O94919 500 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 CRTAMO95727 393 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 USP17L7P0C7H9 530 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 CTNNB1P35222 781 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 TUBP50607 506 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 HDAC4P56524 1084 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 MARC1Q5VT66 337 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 DCLRE1AQ6PJP8 1040 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 LRRC55Q6ZSA7 311 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 C4orf32Q8N8J7 132 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 CLEC4DQ8WXI8 215 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 HIPK3Q9H422 1215 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 TBC1D13Q9NVG8 400 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 DRG1Q9Y295 367 aaKnown RBP14.34□□□□□ -0.11
RPL28-202ENST00000426763 EFCAB14O75071 495 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 PPM1AP35813 382 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 RMDN2Q96LZ7 410 aa14.34□□□□□ -0.11
RPL28-202ENST00000426763 UNCXA6NJT0 531 aa14.33□□□□□ -0.11
RPL28-202ENST00000426763 WEE1P30291 646 aa14.33□□□□□ -0.11
RPL28-202ENST00000426763 ZNF284Q2VY69 593 aa14.33□□□□□ -0.11
RPL28-202ENST00000426763 HIBCHQ6NVY1 386 aaPredicted RBP14.33□□□□□ -0.11
RPL28-202ENST00000426763 CCDC124Q96CT7 223 aaKnown RBP14.33□□□□□ -0.11
RPL28-202ENST00000426763 IGFLR1Q9H665 355 aa14.33□□□□□ -0.11
RPL28-202ENST00000426763 TRMT6Q9UJA5 497 aaKnown RBP14.33□□□□□ -0.11
RPL28-202ENST00000426763 RRP15Q9Y3B9 282 aaKnown RBP14.33□□□□□ -0.11
RPL28-202ENST00000426763 LRRC10BA6NIK2 292 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 SERPIND1P05546 499 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 OR1E1P30953 314 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 USP41Q3LFD5 358 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 SNX31Q8N9S9 440 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 TMEM121Q9BTD3 319 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 FICDQ9BVA6 458 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 SPATA16Q9BXB7 569 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 PRR23AA6NEV1 266 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 NPR3P17342 541 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 ECM1Q16610 540 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 EEF1DP3Q658K8 133 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 AMIGO3Q86WK7 504 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 PALB2Q86YC2 1186 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 ACTL9Q8TC94 416 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 GBP5Q96PP8 586 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 RBM22Q9NW64 420 aaKnown RBP eCLIP14.33□□□□□ -0.12
RPL28-202ENST00000426763 SIK3Q9Y2K2 1263 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 TOMM70O94826 608 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 DARSP14868 501 aaKnown RBP14.33□□□□□ -0.12
RPL28-202ENST00000426763 ARMC6Q6NXE6 501 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 APOL5Q9BWW9 433 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 DERAQ9Y315 318 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 SEPT4O43236 478 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 ARF4P18085 180 aaPredicted RBP14.33□□□□□ -0.12
RPL28-202ENST00000426763 ITGALP20701 1170 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 KCNA10Q16322 511 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 LRRC52Q8N7C0 313 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 HSFY1Q96LI6 401 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 ATP13A1Q9HD20 1204 aa14.33□□□□□ -0.12
RPL28-202ENST00000426763 TSPAN3O60637 253 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 SRP72O76094 671 aaKnown RBP14.32□□□□□ -0.12
RPL28-202ENST00000426763 ASGR1P07306 291 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 SELPP16109 830 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 KRT4P19013 534 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 FAM83EQ2M2I3 478 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms