RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 GON4LQ3T8J9 2241 aa15.53■□□□□ 0.08
PDAP1-202ENST00000426447 ADAMTS20P59510 1910 aa15.53■□□□□ 0.08
PDAP1-202ENST00000426447 A0A1B0GTW7 788 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 TYRP14679 529 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 STAT6P42226 847 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 TUBP50607 506 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 SLC5A3P53794 718 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 GOLGA8FQ08AF8 430 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 GOLGA8DPQ0D2H9 430 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 RABEP1Q15276 862 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 SNX30Q5VWJ9 437 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 HTR3DQ70Z44 454 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 WBP2Q969T9 261 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 CCDC127Q96BQ5 260 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 CLIC6Q96NY7 704 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 DUSP9Q99956 384 aaKnown RBP15.52■□□□□ 0.08
PDAP1-202ENST00000426447 CD93Q9NPY3 652 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 PPP4R2Q9NY27 417 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 GMIPQ9P107 970 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 KIAA1522Q9P206 1035 aaPredicted RBP15.52■□□□□ 0.08
PDAP1-202ENST00000426447 PCOLCE2Q9UKZ9 415 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 CLIC4Q9Y696 253 aa15.52■□□□□ 0.08
PDAP1-202ENST00000426447 DMXL2Q8TDJ6 3036 aa15.52■□□□□ 0.07
PDAP1-202ENST00000426447 PI4KAP42356 2102 aa15.52■□□□□ 0.07
PDAP1-202ENST00000426447 WASH3PC4AMC7 463 aa15.51■□□□□ 0.07
PDAP1-202ENST00000426447 PRRT4C9JH25 899 aa15.51■□□□□ 0.07
PDAP1-202ENST00000426447 GFRA2O00451 464 aa15.51■□□□□ 0.07
PDAP1-202ENST00000426447 CACNG3O60359 315 aa15.51■□□□□ 0.07
PDAP1-202ENST00000426447 PHACTR2O75167 634 aa15.51■□□□□ 0.07
PDAP1-202ENST00000426447 DGKGP49619 791 aa15.51■□□□□ 0.07
PDAP1-202ENST00000426447 STARD3Q14849 445 aa15.51■□□□□ 0.07
PDAP1-202ENST00000426447 SNRNP35Q16560 246 aaKnown RBP15.51■□□□□ 0.07
PDAP1-202ENST00000426447 GLRX5Q86SX6 157 aa15.51■□□□□ 0.07
PDAP1-202ENST00000426447 ZCCHC9Q8N567 271 aaKnown RBP15.51■□□□□ 0.07
PDAP1-202ENST00000426447 TOE1Q96GM8 510 aaKnown RBP15.51■□□□□ 0.07
PDAP1-202ENST00000426447 GPR174Q9BXC1 333 aa15.51■□□□□ 0.07
PDAP1-202ENST00000426447 GAREM1Q9H706 876 aa15.51■□□□□ 0.07
PDAP1-202ENST00000426447 PRDM16Q9HAZ2 1276 aa15.51■□□□□ 0.07
PDAP1-202ENST00000426447 CD248Q9HCU0 757 aa15.51■□□□□ 0.07
PDAP1-202ENST00000426447 DMAP1Q9NPF5 467 aaPredicted RBP15.51■□□□□ 0.07
PDAP1-202ENST00000426447 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.51■□□□□ 0.072e-11■■■■■ 91.6
PDAP1-202ENST00000426447 COMMD8Q9NX08 183 aa15.51■□□□□ 0.07
PDAP1-202ENST00000426447 LSM7Q9UK45 103 aaKnown RBP15.51■□□□□ 0.07
PDAP1-202ENST00000426447 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.51■□□□□ 0.07
PDAP1-202ENST00000426447 SRPRBQ9Y5M8 271 aaKnown RBP15.51■□□□□ 0.07
PDAP1-202ENST00000426447 ANKRD11Q6UB99 2663 aaPredicted RBP15.51■□□□□ 0.07
PDAP1-202ENST00000426447 DSPP15924 2871 aaKnown RBP15.5■□□□□ 0.07
PDAP1-202ENST00000426447 FRMD3A2A2Y4 597 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 GOLGA8CPA6NN73 597 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 TLR5O60602 858 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 CBFA2T3O75081 653 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 CER1O95813 267 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 NCAM1P13591 858 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 ATP5C1P36542 298 aaKnown RBP15.5■□□□□ 0.07
PDAP1-202ENST00000426447 MATKP42679 507 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 MYL6P60660 151 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 IL27RAQ6UWB1 636 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 FAM35AQ86V20 835 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 RHBDD1Q8TEB9 315 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 BHMTQ93088 406 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 TNIP3Q96KP6 325 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 CGRRF1Q99675 332 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 IL21RQ9HBE5 538 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 TLR8Q9NR97 1041 aaKnown RBP15.5■□□□□ 0.07
PDAP1-202ENST00000426447 TM7SF3Q9NS93 570 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 WSB2Q9NYS7 404 aaPredicted RBP15.5■□□□□ 0.07
PDAP1-202ENST00000426447 FBXO2Q9UK22 296 aaPredicted RBP15.5■□□□□ 0.07
PDAP1-202ENST00000426447 PLXND1Q9Y4D7 1925 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 MYOFQ9NZM1 2061 aa15.5■□□□□ 0.07
PDAP1-202ENST00000426447 PCDH15Q96QU1 1955 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 AP1G2O75843 785 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 TBX18O95935 607 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 ZDHHC11BP0C7U3 371 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 ATICP31939 592 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 CDH8P55286 799 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 CEBPZQ03701 1054 aaKnown RBP15.49■□□□□ 0.07
PDAP1-202ENST00000426447 DCAF12L1Q5VU92 463 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 TMPRSS7Q7RTY8 843 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 CADM4Q8NFZ8 388 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 DNASE2BQ8WZ79 361 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 HPS3Q969F9 1004 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 SYAP1Q96A49 352 aaPredicted RBP15.49■□□□□ 0.07
PDAP1-202ENST00000426447 SMARCD1Q96GM5 515 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 CDC6Q99741 560 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 KLF16Q9BXK1 252 aaPredicted RBP15.49■□□□□ 0.07
PDAP1-202ENST00000426447 FBXO44Q9H4M3 255 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 SCUBE2Q9NQ36 999 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 ITM2CQ9NQX7 267 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 PLK2Q9NYY3 685 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 IL37Q9NZH6 218 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 MARK1Q9P0L2 795 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 STON1Q9Y6Q2 735 aa15.49■□□□□ 0.07
PDAP1-202ENST00000426447 VPS37CA5D8V6 355 aaPredicted RBP15.48■□□□□ 0.07
PDAP1-202ENST00000426447 BCAT2O15382 392 aaPredicted RBP15.48■□□□□ 0.07
PDAP1-202ENST00000426447 SYNCRIPO60506 623 aaKnown RBP15.48■□□□□ 0.07
PDAP1-202ENST00000426447 CILPO75339 1184 aa15.48■□□□□ 0.07
PDAP1-202ENST00000426447 ACADMP11310 421 aa15.48■□□□□ 0.07
PDAP1-202ENST00000426447 OXTRP30559 389 aa15.48■□□□□ 0.07
PDAP1-202ENST00000426447 CYP2J2P51589 502 aa15.48■□□□□ 0.07
PDAP1-202ENST00000426447 CYP4F3Q08477 520 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms