RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 TFE3P19532 575 aaPredicted RBP15.03■□□□□ -0
CDK3-201ENST00000425876 BDNFP23560 247 aa15.03■□□□□ -0
CDK3-201ENST00000425876 PLTPP55058 493 aa15.03■□□□□ -0
CDK3-201ENST00000425876 CCL23P55773 120 aa15.03■□□□□ -0
CDK3-201ENST00000425876 CAV1Q03135 178 aa15.03■□□□□ -0
CDK3-201ENST00000425876 ELAVL2Q12926 359 aaKnown RBP15.03■□□□□ -0
CDK3-201ENST00000425876 CALCOCO2Q13137 446 aa15.03■□□□□ -0
CDK3-201ENST00000425876 MRPL58Q14197 206 aaKnown RBP15.03■□□□□ -0
CDK3-201ENST00000425876 KRT81Q14533 505 aa15.03■□□□□ -0
CDK3-201ENST00000425876 NFE2Q16621 373 aaPredicted RBP15.03■□□□□ -0
CDK3-201ENST00000425876 BEND5Q7L4P6 421 aa15.03■□□□□ -0
CDK3-201ENST00000425876 TMC3Q7Z5M5 1100 aa15.03■□□□□ -0
CDK3-201ENST00000425876 RFX6Q8HWS3 928 aa15.03■□□□□ -0
CDK3-201ENST00000425876 SPATA2LQ8IUW3 424 aaPredicted RBP15.03■□□□□ -0
CDK3-201ENST00000425876 ALLCQ8N6M5 410 aa15.03■□□□□ -0
CDK3-201ENST00000425876 BBOF1Q8ND07 529 aa15.03■□□□□ -0
CDK3-201ENST00000425876 FBXO25Q8TCJ0 367 aa15.03■□□□□ -0
CDK3-201ENST00000425876 FAF2Q96CS3 445 aa15.03■□□□□ -0
CDK3-201ENST00000425876 SNF8Q96H20 258 aa15.03■□□□□ -0
CDK3-201ENST00000425876 FUBP3Q96I24 572 aaKnown RBP eCLIP15.03■□□□□ -0
CDK3-201ENST00000425876 RNF157Q96PX1 679 aa15.03■□□□□ -0
CDK3-201ENST00000425876 TMEM209Q96SK2 561 aa15.03■□□□□ -0
CDK3-201ENST00000425876 SLC9A7Q96T83 725 aa15.03■□□□□ -0
CDK3-201ENST00000425876 TRIM62Q9BVG3 475 aa15.03■□□□□ -0
CDK3-201ENST00000425876 MAK16Q9BXY0 300 aaKnown RBP15.03■□□□□ -0
CDK3-201ENST00000425876 ADAM33Q9BZ11 813 aa15.03■□□□□ -0
CDK3-201ENST00000425876 TXLNGYQ9BZA5 131 aa15.03■□□□□ -0
CDK3-201ENST00000425876 PRDM16Q9HAZ2 1276 aa15.03■□□□□ -0
CDK3-201ENST00000425876 ASIC3Q9UHC3 531 aa15.03■□□□□ -0
CDK3-201ENST00000425876 USP3Q9Y6I4 520 aa15.03■□□□□ -0
CDK3-201ENST00000425876 TNRC18O15417 2968 aaPredicted RBP15.03■□□□□ -0
CDK3-201ENST00000425876 OR6C75A6NL08 312 aa15.02■□□□□ -0
CDK3-201ENST00000425876 PPFIA2O75334 1257 aa15.02■□□□□ -0
CDK3-201ENST00000425876 IL4RP24394 825 aa15.02■□□□□ -0
CDK3-201ENST00000425876 KLRC2P26717 231 aa15.02■□□□□ -0
CDK3-201ENST00000425876 CYP2C18P33260 490 aa15.02■□□□□ -0
CDK3-201ENST00000425876 SULT1E1P49888 294 aa15.02■□□□□ -0
CDK3-201ENST00000425876 AIF1P55008 147 aa15.02■□□□□ -0
CDK3-201ENST00000425876 OTUD4Q01804 1114 aaKnown RBP15.02■□□□□ -0
CDK3-201ENST00000425876 HSP90B2PQ58FF3 399 aa15.02■□□□□ -0
CDK3-201ENST00000425876 DCAF6Q58WW2 860 aa15.02■□□□□ -0
CDK3-201ENST00000425876 CNKSR3Q6P9H4 555 aa15.02■□□□□ -0
CDK3-201ENST00000425876 GPRIN1Q7Z2K8 1008 aa15.02■□□□□ -0
CDK3-201ENST00000425876 ACTL9Q8TC94 416 aa15.02■□□□□ -0
CDK3-201ENST00000425876 NDRG1Q92597 394 aaKnown RBP15.02■□□□□ -0
CDK3-201ENST00000425876 PGAP3Q96FM1 320 aaPredicted RBP15.02■□□□□ -0
CDK3-201ENST00000425876 PKNOX2Q96KN3 472 aa15.02■□□□□ -0
CDK3-201ENST00000425876 PPP1R12CQ9BZL4 782 aa15.02■□□□□ -0
CDK3-201ENST00000425876 TSPYL1Q9H0U9 437 aa15.02■□□□□ -0
CDK3-201ENST00000425876 ZNF148Q9UQR1 794 aa15.02■□□□□ -0
CDK3-201ENST00000425876 FAN1Q9Y2M0 1017 aa15.02■□□□□ -0
CDK3-201ENST00000425876 SF3B1O75533 1304 aaKnown RBP eCLIP15.02□□□□□ -0.01
CDK3-201ENST00000425876 YJEFN3A6XGL0 299 aa15.02□□□□□ -0.01
CDK3-201ENST00000425876 E7ENQ6 273 aa15.02□□□□□ -0.01
CDK3-201ENST00000425876 AGPSO00116 658 aa15.02□□□□□ -0.01
CDK3-201ENST00000425876 NDC80O14777 642 aa15.02□□□□□ -0.01
CDK3-201ENST00000425876 LTFP02788 710 aa15.02□□□□□ -0.01
CDK3-201ENST00000425876 FYNP06241 537 aa15.02□□□□□ -0.01
CDK3-201ENST00000425876 ATF2P15336 505 aa15.02□□□□□ -0.01
CDK3-201ENST00000425876 FGFR3P22607 806 aa15.02□□□□□ -0.01
CDK3-201ENST00000425876 L1CAMP32004 1257 aa15.02□□□□□ -0.01
CDK3-201ENST00000425876 RDXP35241 583 aaKnown RBP15.02□□□□□ -0.01
CDK3-201ENST00000425876 SLC11A1P49279 550 aa15.02□□□□□ -0.01
CDK3-201ENST00000425876 VARS2Q5ST30 1063 aaKnown RBP15.02□□□□□ -0.01
CDK3-201ENST00000425876 CFAP58Q5T655 872 aa15.02□□□□□ -0.01
CDK3-201ENST00000425876 OTUD1Q5VV17 481 aaPredicted RBP15.02□□□□□ -0.01
CDK3-201ENST00000425876 BHLHA9Q7RTU4 235 aa15.02□□□□□ -0.01
CDK3-201ENST00000425876 OXCT2Q9BYC2 517 aaPredicted RBP15.02□□□□□ -0.01
CDK3-201ENST00000425876 MARCH5Q9NX47 278 aa15.02□□□□□ -0.01
CDK3-201ENST00000425876 RCOR3Q9P2K3 495 aaPredicted RBP15.02□□□□□ -0.01
CDK3-201ENST00000425876 KIAA0100Q14667 2235 aaKnown RBP15.02□□□□□ -0.01
CDK3-201ENST00000425876 PTPRDP23468 1912 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 KRT14P02533 472 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 GALTP07902 379 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 USP17L7P0C7H9 530 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 ZFXP17010 805 aaPredicted RBP15.01□□□□□ -0.01
CDK3-201ENST00000425876 TGM2P21980 687 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 GATMP50440 423 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 DHX9Q08211 1270 aaKnown RBP15.01□□□□□ -0.01
CDK3-201ENST00000425876 MMRN1Q13201 1228 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 IKBKEQ14164 716 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 ANKRD20A8PQ5CZ79 823 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 ZC3H12AQ5D1E8 599 aaKnown RBP15.01□□□□□ -0.01
CDK3-201ENST00000425876 SLC9A4Q6AI14 798 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 ZNF280DQ6N043 979 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 RHBDF2Q6PJF5 856 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 VSTM1Q6UX27 236 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 LRIG3Q6UXM1 1119 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 HFE2Q6ZVN8 426 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 GSTA5Q7RTV2 222 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 LRRC43Q8N309 656 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.01□□□□□ -0.01
CDK3-201ENST00000425876 SH3GL2Q99962 352 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 FAM118BQ9BPY3 351 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 RHOBTB2Q9BYZ6 727 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 PCDH9Q9HC56 1237 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 TMEM39AQ9NV64 488 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 FZD10Q9ULW2 581 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 AP4E1Q9UPM8 1137 aa15.01□□□□□ -0.01
CDK3-201ENST00000425876 SCN5AQ14524 2016 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms