RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 UNKQ9C0B0 810 aaKnown RBP12.72□□□□□ -0.37
CLCN4-203ENST00000421085 ACOT9Q9Y305 439 aa12.72□□□□□ -0.37
CLCN4-203ENST00000421085 IPPQ9Y573 584 aa12.72□□□□□ -0.37
CLCN4-203ENST00000421085 A0A087WXM4 84 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 TALDO1P37837 337 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 CENPAP49450 140 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 ITGB3BPQ13352 177 aaPredicted RBP12.71□□□□□ -0.37
CLCN4-203ENST00000421085 DDR2Q16832 855 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 SEZ6Q53EL9 994 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 MRNIPQ6NTE8 343 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 CAPSLQ8WWF8 208 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 TATDN2Q93075 761 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 GINS4Q9BRT9 223 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 PTGES3LE9PB15 166 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 ME2P23368 584 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 KCNJ2P63252 427 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 MCL1Q07820 350 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 COX10Q12887 443 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 NFIL3Q16649 462 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 FAM180AQ6UWF9 173 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 CRELD2Q6UXH1 353 aaPredicted RBP12.71□□□□□ -0.37
CLCN4-203ENST00000421085 FIG4Q92562 907 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 SRPK1Q96SB4 655 aaKnown RBP12.71□□□□□ -0.37
CLCN4-203ENST00000421085 NAT9Q9BTE0 207 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 TRPC7Q9HCX4 862 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 DAGLAQ9Y4D2 1042 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 PXDNLA1KZ92 1463 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 DPYSL4O14531 572 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 CD4P01730 458 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 SSTR1P30872 391 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 CHI3L1P36222 383 aaPredicted RBP12.71□□□□□ -0.37
CLCN4-203ENST00000421085 ELK3P41970 407 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 SERPINH1P50454 418 aaKnown RBP12.71□□□□□ -0.37
CLCN4-203ENST00000421085 NRF1Q16656 503 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 TMEM26Q6ZUK4 368 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 SLC44A2Q8IWA5 706 aaPredicted RBP12.71□□□□□ -0.37
CLCN4-203ENST00000421085 SVOPQ8N4V2 548 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 PCDH9Q9HC56 1237 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 MAP3K20Q9NYL2 800 aaKnown RBP12.71□□□□□ -0.37
CLCN4-203ENST00000421085 USP18Q9UMW8 372 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 AAR2Q9Y312 384 aaKnown RBP12.71□□□□□ -0.37
CLCN4-203ENST00000421085 ARIH1Q9Y4X5 557 aaPredicted RBP12.71□□□□□ -0.37
CLCN4-203ENST00000421085 SNPHO15079 494 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 MMP10P09238 476 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 GPR162Q16538 588 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 C11orf96Q7Z7L8 435 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 ST13P5Q8NFI4 369 aaPredicted RBP12.71□□□□□ -0.37
CLCN4-203ENST00000421085 OSCP1Q8WVF1 389 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 KAT2BQ92831 832 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 POP1Q99575 1024 aaKnown RBP12.71□□□□□ -0.37
CLCN4-203ENST00000421085 APOL2Q9BQE5 337 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 KIAA1683Q9H0B3 1180 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 PCDHB8Q9UN66 801 aa12.71□□□□□ -0.37
CLCN4-203ENST00000421085 MSH4O15457 936 aa12.71□□□□□ -0.38
CLCN4-203ENST00000421085 MYCP01106 439 aaPredicted RBP12.71□□□□□ -0.38
CLCN4-203ENST00000421085 KRT20P35900 424 aa12.71□□□□□ -0.38
CLCN4-203ENST00000421085 ROR2Q01974 943 aaKnown RBP12.71□□□□□ -0.38
CLCN4-203ENST00000421085 TRAF3Q13114 568 aa12.71□□□□□ -0.38
CLCN4-203ENST00000421085 TRIM28Q13263 835 aaKnown RBP12.71□□□□□ -0.38
CLCN4-203ENST00000421085 MPP3Q13368 585 aa12.71□□□□□ -0.38
CLCN4-203ENST00000421085 DDX39BQ13838 428 aaKnown RBP12.71□□□□□ -0.38
CLCN4-203ENST00000421085 DGKKQ5KSL6 1271 aa12.71□□□□□ -0.38
CLCN4-203ENST00000421085 TTLL6Q8N841 843 aa12.71□□□□□ -0.38
CLCN4-203ENST00000421085 FANCEQ9HB96 536 aa12.71□□□□□ -0.38
CLCN4-203ENST00000421085 HMG20AQ9NP66 347 aa12.71□□□□□ -0.38
CLCN4-203ENST00000421085 MAP3K13O43283 966 aa12.71□□□□□ -0.38
CLCN4-203ENST00000421085 CPSF4O95639 269 aaKnown RBP12.71□□□□□ -0.38
CLCN4-203ENST00000421085 PECAM1P16284 738 aaPredicted RBP12.71□□□□□ -0.38
CLCN4-203ENST00000421085 FGFR3P22607 806 aa12.71□□□□□ -0.38
CLCN4-203ENST00000421085 C1DQ13901 141 aaKnown RBP12.71□□□□□ -0.38
CLCN4-203ENST00000421085 GIT2Q14161 759 aa12.71□□□□□ -0.38
CLCN4-203ENST00000421085 VEPH1Q14D04 833 aa12.71□□□□□ -0.38
CLCN4-203ENST00000421085 SPIRE2Q8WWL2 714 aa12.71□□□□□ -0.38
CLCN4-203ENST00000421085 KCNH7Q9NS40 1196 aa12.71□□□□□ -0.38
CLCN4-203ENST00000421085 PBRM1Q86U86 1689 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 INO80Q9ULG1 1556 aaPredicted RBP12.7□□□□□ -0.38
CLCN4-203ENST00000421085 DCXO43602 365 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 SNX3O60493 162 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 AKAP3O75969 853 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 ATG7O95352 703 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 LDLRP01130 860 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 RPA3P35244 121 aaPredicted RBP12.7□□□□□ -0.38
CLCN4-203ENST00000421085 RPS7P62081 194 aaKnown RBP12.7□□□□□ -0.38
CLCN4-203ENST00000421085 TROAPQ12815 778 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 Q4G0T1 1027 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 KCNV1Q6PIU1 500 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 ZCCHC23Q6ZST2 131 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 ZNF513Q8N8E2 541 aaPredicted RBP12.7□□□□□ -0.38
CLCN4-203ENST00000421085 UTP15Q8TED0 518 aaKnown RBP12.7□□□□□ -0.38
CLCN4-203ENST00000421085 CENPTQ96BT3 561 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 C1orf50Q9BV19 199 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 NYAP2Q9P242 653 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 SHOC2Q9UQ13 582 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 CHKBQ9Y259 395 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 MPOP05164 745 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 RBP1P09455 135 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 MRPS22P82650 360 aaKnown RBP12.7□□□□□ -0.38
CLCN4-203ENST00000421085 MTMR2Q13614 643 aa12.7□□□□□ -0.38
CLCN4-203ENST00000421085 FASTKQ14296 549 aaKnown RBP12.7□□□□□ -0.38
CLCN4-203ENST00000421085 SV2CQ496J9 727 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms