RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 SERPINB11Q96P15 392 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 ERP44Q9BS26 406 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 DMAP1Q9NPF5 467 aaPredicted RBP8.73□□□□□ -1.01
UBR4-206ENST00000419533 ZSCAN9O15535 394 aaPredicted RBP8.73□□□□□ -1.01
UBR4-206ENST00000419533 TBX4P57082 545 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 CCZ1BP86790 482 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 CCZ1P86791 482 aaPredicted RBP8.73□□□□□ -1.01
UBR4-206ENST00000419533 BEX3Q00994 111 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 MCL1Q07820 350 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 AGAP9Q5VTM2 703 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 ERAP2Q6P179 960 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 RAD9BQ6WBX8 426 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 ZNF507Q8TCN5 953 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 SKA1Q96BD8 255 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 FAM161BQ96MY7 647 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 FAM167BQ9BTA0 163 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 DCLK3Q9C098 648 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 ALG13Q9NP73 1137 aaKnown RBP8.73□□□□□ -1.01
UBR4-206ENST00000419533 SCHIP1Q9P0W5 487 aaPredicted RBP8.73□□□□□ -1.01
UBR4-206ENST00000419533 PLAGL2Q9UPG8 496 aa8.73□□□□□ -1.01
UBR4-206ENST00000419533 CSDE1O75534 798 aaKnown RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 SOX10P56693 466 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 NTRK3Q16288 839 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 LONRF1Q17RB8 773 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 CCDC149Q6ZUS6 474 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 SV2AQ7L0J3 742 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 PCYOX1LQ8NBM8 494 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 NR1H4Q96RI1 486 aaPredicted RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 MRPL1Q9BYD6 325 aaKnown RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 SEMA6BQ9H3T3 888 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 TBC1D13Q9NVG8 400 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 USP18Q9UMW8 372 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 FRMPD4Q14CM0 1322 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 CBX4O00257 560 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 ZW10O43264 779 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 TMEM259Q4ZIN3 620 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 FIGNQ5HY92 759 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 DSG4Q86SJ6 1040 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 ACSF2Q96CM8 615 aaPredicted RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 ADAM2Q99965 735 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 FTHL17Q9BXU8 183 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 RBM12Q9NTZ6 932 aaKnown RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 STOML1Q9UBI4 398 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 FAM47DPA6NHR8 397 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 ADCY6O43306 1168 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 DDHD2O94830 711 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 INHAP05111 366 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 PAX3P23760 479 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 CAMK2GQ13555 558 aaPredicted RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 CLEC16AQ2KHT3 1053 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 BRSK2Q8IWQ3 736 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 SLC20A1Q8WUM9 679 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 DNAJC7Q99615 494 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 CLPBQ9H078 707 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 MRPL17Q9NRX2 175 aaKnown RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 ZNF112Q9UJU3 913 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 FBXL21Q9UKT6 434 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 SDR42E2A6NKP2 422 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 GOLGA8TH3BQL2 631 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 UBA1P22314 1058 aaKnown RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 NDST1P52848 882 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 ALDH18A1P54886 795 aaKnown RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 ZC3H12BQ5HYM0 836 aaKnown RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 CENPPQ6IPU0 288 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 TTI2Q6NXR4 508 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 FBXO46Q6PJ61 603 aaPredicted RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 SPATA21Q7Z572 469 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 MYO1HQ8N1T3 1032 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 TRAPPC12Q8WVT3 735 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 ZNF558Q96NG5 402 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 NAT9Q9BTE0 207 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 NFKBIZQ9BYH8 718 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 EPC1Q9H2F5 836 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 TMEM134Q9H6X4 195 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 CYP39A1Q9NYL5 469 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 HPSEQ9Y251 543 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 TIMM13Q9Y5L4 95 aaPredicted RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 NUP98P52948 1817 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 ADGRA2Q96PE1 1338 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 LACTBL1A8MY62 500 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 RAD51CO43502 376 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 PAEPP09466 180 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 MRPS6P82932 125 aaKnown RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 C1QBPQ07021 282 aaKnown RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 TMEM119Q4V9L6 283 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 PABPC1LQ4VXU2 614 aaKnown RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 LBX2Q6XYB7 198 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 FAM131BQ86XD5 332 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 RFWD2Q8NHY2 731 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 RXFP2Q8WXD0 754 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 BRD8Q9H0E9 1235 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 TRIM10Q9UDY6 481 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 LNPEPQ9UIQ6 1025 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 TSPAN16Q9UKR8 245 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 CDV3Q9UKY7 258 aaKnown RBP8.72□□□□□ -1.01
UBR4-206ENST00000419533 CDY2AQ9Y6F7 541 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 CDY1Q9Y6F8 540 aa8.72□□□□□ -1.01
UBR4-206ENST00000419533 RPTORQ8N122 1335 aa8.71□□□□□ -1.01
UBR4-206ENST00000419533 F8VZ95 297 aa8.71□□□□□ -1.01
UBR4-206ENST00000419533 DYRK3O43781 588 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms