RNA–Protein interactions for RNA: ENST00000417107.5

HDAC7-204, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-204ENST00000417107 NAIF1Q69YI7 327 aaPredicted RBP19.02■□□□□ 0.64
HDAC7-204ENST00000417107 HEATR6Q6AI08 1181 aaKnown RBP19.02■□□□□ 0.64
HDAC7-204ENST00000417107 DPY19L2P1Q6NXN4 242 aa19.02■□□□□ 0.64
HDAC7-204ENST00000417107 GPRIN1Q7Z2K8 1008 aa19.02■□□□□ 0.64
HDAC7-204ENST00000417107 PIGZQ86VD9 579 aa19.02■□□□□ 0.64
HDAC7-204ENST00000417107 UBA3Q8TBC4 463 aa19.02■□□□□ 0.64
HDAC7-204ENST00000417107 TLR8Q9NR97 1041 aaKnown RBP19.02■□□□□ 0.64
HDAC7-204ENST00000417107 GMIPQ9P107 970 aa19.02■□□□□ 0.64
HDAC7-204ENST00000417107 OBSL1O75147 1896 aa19.02■□□□□ 0.64
HDAC7-204ENST00000417107 KIF26AQ9ULI4 1882 aaPredicted RBP19.01■□□□□ 0.63
HDAC7-204ENST00000417107 BECN2A8MW95 431 aa19.01■□□□□ 0.63
HDAC7-204ENST00000417107 K7ESF4 209 aa19.01■□□□□ 0.63
HDAC7-204ENST00000417107 XPO1O14980 1071 aaKnown RBP19.01■□□□□ 0.63
HDAC7-204ENST00000417107 SETSIPP0DME0 302 aa19.01■□□□□ 0.63
HDAC7-204ENST00000417107 BRD2P25440 801 aaKnown RBP19.01■□□□□ 0.63
HDAC7-204ENST00000417107 ZNF77Q15935 545 aa19.01■□□□□ 0.63
HDAC7-204ENST00000417107 FSTL4Q6MZW2 842 aa19.01■□□□□ 0.63
HDAC7-204ENST00000417107 PKN3Q6P5Z2 889 aa19.01■□□□□ 0.63
HDAC7-204ENST00000417107 DHX40Q8IX18 779 aaKnown RBP19.01■□□□□ 0.63
HDAC7-204ENST00000417107 SHC3Q92529 594 aa19.01■□□□□ 0.63
HDAC7-204ENST00000417107 ZSWIM1Q9BR11 485 aa19.01■□□□□ 0.63
HDAC7-204ENST00000417107 RNF38Q9H0F5 515 aa19.01■□□□□ 0.63
HDAC7-204ENST00000417107 HSD3B7Q9H2F3 369 aa19.01■□□□□ 0.63
HDAC7-204ENST00000417107 FBRSL1Q9HCM7 1045 aaKnown RBP19.01■□□□□ 0.63
HDAC7-204ENST00000417107 ARHGAP26Q9UNA1 814 aa19.01■□□□□ 0.63
HDAC7-204ENST00000417107 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.01■□□□□ 0.63
HDAC7-204ENST00000417107 WNT6Q9Y6F9 365 aa19.01■□□□□ 0.63
HDAC7-204ENST00000417107 USP3Q9Y6I4 520 aa19.01■□□□□ 0.63
HDAC7-204ENST00000417107 DENND4CQ5VZ89 1909 aa19.01■□□□□ 0.63
HDAC7-204ENST00000417107 MED7O43513 233 aa19■□□□□ 0.63
HDAC7-204ENST00000417107 OAS1P00973 400 aaKnown RBP19■□□□□ 0.63
HDAC7-204ENST00000417107 CALCAP01258 141 aa19■□□□□ 0.63
HDAC7-204ENST00000417107 TUBP50607 506 aa19■□□□□ 0.63
HDAC7-204ENST00000417107 SLC7A9P82251 487 aa19■□□□□ 0.63
HDAC7-204ENST00000417107 PDGFRLQ15198 375 aa19■□□□□ 0.63
HDAC7-204ENST00000417107 PKDCCQ504Y2 493 aa19■□□□□ 0.63
HDAC7-204ENST00000417107 TMEM196Q5HYL7 178 aa19■□□□□ 0.63
HDAC7-204ENST00000417107 RAB41Q5JT25 222 aa19■□□□□ 0.63
HDAC7-204ENST00000417107 SH3RF2Q8TEC5 729 aa19■□□□□ 0.63
HDAC7-204ENST00000417107 LSM14BQ9BX40 385 aaKnown RBP19■□□□□ 0.63
HDAC7-204ENST00000417107 LRRC4Q9HBW1 653 aa19■□□□□ 0.63
HDAC7-204ENST00000417107 PLCB1Q9NQ66 1216 aa19■□□□□ 0.63
HDAC7-204ENST00000417107 DUS2Q9NX74 493 aaKnown RBP19■□□□□ 0.63
HDAC7-204ENST00000417107 FOXN3O00409 490 aaPredicted RBP18.99■□□□□ 0.63
HDAC7-204ENST00000417107 HRO43593 1189 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 CAVIN2O95810 425 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 OLFM2O95897 454 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 TCF3P15923 654 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 PLA2G4AP47712 749 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 TKTL1P51854 596 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 GRSF1Q12849 480 aaKnown RBP eCLIP18.99■□□□□ 0.63
HDAC7-204ENST00000417107 USP4Q13107 963 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 ZSCAN23Q3MJ62 389 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 PRR23BQ6ZRT6 265 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 CCDC186Q7Z3E2 898 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 SLC35F5Q8WV83 523 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 OSCP1Q8WVF1 389 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 ZNF606Q8WXB4 792 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 KCTD13Q8WZ19 329 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 LINC00597Q9H2U6 94 aa18.99■□□□□ 0.63
HDAC7-204ENST00000417107 POLR3BQ9NW08 1133 aaPredicted RBP18.99■□□□□ 0.63
HDAC7-204ENST00000417107 LGALS16A8MUM7 142 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 M0QYV0 167 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 TULP2O00295 520 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 TRDMT1O14717 391 aaKnown RBP18.98■□□□□ 0.63
HDAC7-204ENST00000417107 CYP26A1O43174 497 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 COCHO43405 550 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 THAP12O43422 761 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 PAPSS2O95340 614 aaPredicted RBP18.98■□□□□ 0.63
HDAC7-204ENST00000417107 EGFP01133 1207 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 MBL2P11226 248 aaPredicted RBP18.98■□□□□ 0.63
HDAC7-204ENST00000417107 UCHL3P15374 230 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 GNA15P30679 374 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 GJA4P35212 333 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 IFNAR2P48551 515 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 PGFP49763 221 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 PSEN1P49768 467 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 GALK1P51570 392 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 ZXDBP98169 803 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 PTK2Q05397 1052 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 RAPGEF1Q13905 1077 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 DRAP1Q14919 205 aaPredicted RBP18.98■□□□□ 0.63
HDAC7-204ENST00000417107 IQCB1Q15051 598 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 ARHGAP18Q8N392 663 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 SYNPOQ8N3V7 929 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 CPA6Q8N4T0 437 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 SECISBP2LQ93073 1101 aaKnown RBP18.98■□□□□ 0.63
HDAC7-204ENST00000417107 STK33Q9BYT3 514 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 NACA2Q9H009 215 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 ECT2Q9H8V3 914 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 AJAP1Q9UKB5 411 aaPredicted RBP18.98■□□□□ 0.63
HDAC7-204ENST00000417107 RAB23Q9ULC3 237 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 CPQQ9Y646 472 aa18.98■□□□□ 0.63
HDAC7-204ENST00000417107 ZNF638Q14966 1978 aaKnown RBP18.97■□□□□ 0.63
HDAC7-204ENST00000417107 A0A1W2PQH9 124 aa18.97■□□□□ 0.63
HDAC7-204ENST00000417107 LEFTY2O00292 366 aa18.97■□□□□ 0.63
HDAC7-204ENST00000417107 ZBED1O96006 694 aa18.97■□□□□ 0.63
HDAC7-204ENST00000417107 ATP1A3P13637 1013 aa18.97■□□□□ 0.63
HDAC7-204ENST00000417107 ATP5C1P36542 298 aaKnown RBP18.97■□□□□ 0.63
HDAC7-204ENST00000417107 PXNP49023 591 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms