RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 FTH1P19P0C7X4 201 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CCDC192P0DO97 292 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 NPR1P16066 1061 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CDH2P19022 906 aaPredicted RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 GALP22466 123 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CPT2P23786 658 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CTNNA2P26232 953 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 MSX1P28360 303 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 GABRB3P28472 473 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 EPHA8P29322 1005 aaPredicted RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 S100A5P33763 92 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 ARCN1P48444 511 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CARSP49589 748 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 HARS2P49590 506 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 ARL4DP49703 201 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 RGS3P49796 1198 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 ARFIP2P53365 341 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 LGALS4P56470 323 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 MAP3K7CLP57077 242 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 ERVFC1P60507 584 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 TGFB2P61812 414 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 PRR20EP86478 221 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 PRR20CP86479 221 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 PRR20DP86480 221 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 PRR20BP86481 221 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 PRR20AP86496 221 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 ZNF200P98182 395 aaPredicted RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CYP4F8P98187 520 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 GSTM4Q03013 218 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 PRKCZQ05513 592 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 PPATQ06203 517 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 GOLGA8DPQ0D2H9 430 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 GPS1Q13098 491 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CAPSQ13938 189 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 SQLEQ14534 574 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 NFIXQ14938 502 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 RPS6KA2Q15349 733 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 NFIL3Q16649 462 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 IFI16Q16666 785 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 HADHQ16836 314 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 ZNF827Q17R98 1081 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 ARHGAP15Q53QZ3 475 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CCDC178Q5BJE1 867 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 PITRM1Q5JRX3 1037 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 RAB41Q5JT25 222 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 ANGEL2Q5VTE6 544 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CST9LP1Q5W188 147 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 KANK2Q63ZY3 851 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CWF19L1Q69YN2 538 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 ESRP1Q6NXG1 681 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 PAPD4Q6PIY7 484 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 OLFML1Q6UWY5 402 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 ADGRG6Q86SQ4 1221 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 ZNF598Q86UK7 904 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 OSTM1Q86WC4 334 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CEP57Q86XR8 500 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 PHYKPLQ8IUZ5 450 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 KSR1Q8IVT5 923 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 SYCP3Q8IZU3 236 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 FBXW8Q8N3Y1 598 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 WDTC1Q8N5D0 677 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 SH2D3CQ8N5H7 860 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 AADATQ8N5Z0 425 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 TRIML2Q8N7C3 387 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 LINC00469Q8N7U9 141 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 VGLL2Q8N8G2 317 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CHST13Q8NET6 341 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 TRIM58Q8NG06 486 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 FAM76AQ8TAV0 307 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 MIPOL1Q8TD10 442 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 BCAS4Q8TDM0 211 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 ACMSDQ8TDX5 336 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 SLC13A3Q8WWT9 602 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CPT1BQ92523 772 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 STAMQ92783 540 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 KAT5Q92993 513 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 RAB7BQ96AH8 199 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 TRIM43Q96BQ3 446 aaPredicted RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 C3orf49Q96BT1 292 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 C19orf60Q96EN9 201 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 C11orf24Q96F05 449 aaPredicted RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 EEF2KMTQ96G04 330 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 ARL5BQ96KC2 179 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 FER1L6-AS2Q96M78 137 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CFAP57Q96MR6 1250 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 GCNAQ96QF7 691 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 GAL3ST4Q96RP7 486 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 DMRTA2Q96SC8 542 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 TUBB6Q9BUF5 446 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 MLPHQ9BV36 600 aaPredicted RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CARD11Q9BXL7 1154 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 MRPL1Q9BYD6 325 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 MTMR12Q9C0I1 747 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CCSER1Q9C0I3 900 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 TINAGL1Q9GZM7 467 aaPredicted RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 LSG1Q9H089 658 aaKnown RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 CARD9Q9H257 536 aa3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 TP63Q9H3D4 680 aaPredicted RBP3.29□□□□□ -1.88
CTDSPL-203ENST00000416688 WDCPQ9H6R7 721 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms