RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 CD58P19256 250 aa17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 P2RY2P41231 377 aa17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 GRIA2P42262 883 aa17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 WASP42768 502 aa17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 MCCD1P59942 119 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 ELF2Q15723 593 aa17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 NFIL3Q16649 462 aa17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 DDX42Q86XP3 938 aaKnown RBP eCLIP17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 TAF4BQ92750 862 aa17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 CYFIP2Q96F07 1278 aa17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 HNRNPABQ99729 332 aaKnown RBP17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 CD248Q9HCU0 757 aa17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 CYLDQ9NQC7 956 aa17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 COMMD8Q9NX08 183 aa17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 TBC1D14Q9P2M4 693 aa17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 SH3BP1Q9Y3L3 701 aa17.43■□□□□ 0.38
SCAMP4-203ENST00000411971 ZFHX4Q86UP3 3567 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 A0A1W2PQH9 124 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 GIPC1O14908 333 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 MAPK13O15264 365 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 CALUO43852 315 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 RHOBTB1O94844 696 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 ACO1P21399 889 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 PTGER3P43115 390 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 KRT85P78386 507 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 GAD2Q05329 585 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 MAP7D1Q3KQU3 841 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 PPP1R26Q5T8A7 1209 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 IL31Q6EBC2 164 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 TOGARAM2Q6ZUX3 1019 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 HTR3DQ70Z44 454 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 FAM186BQ8IYM0 893 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 ARID3AQ99856 593 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 DUSP9Q99956 384 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 EDEM2Q9BV94 578 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 LSM14BQ9BX40 385 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 CD93Q9NPY3 652 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 TMEM74BQ9NUR3 256 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 SCML2Q9UQR0 700 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 FRMD4BQ9Y2L6 1034 aa17.42■□□□□ 0.38
SCAMP4-203ENST00000411971 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 C4orf47A7E2U8 309 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 PRRT4C9JH25 899 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 CDX4O14627 284 aaPredicted RBP17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 FOXD2O60548 495 aaPredicted RBP17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 ZNF202O95125 648 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 MYL1P05976 194 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 FAM200BP0CF97 657 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 PMLP29590 882 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 TNFRSF4P43489 277 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 IRX4P78413 519 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 ANO4Q32M45 955 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 ZNF394Q53GI3 561 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 USP39Q53GS9 565 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 EGFLAMQ63HQ2 1017 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 RNF43Q68DV7 783 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 ARMCX6Q7L4S7 300 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 TMEFF1Q8IYR6 380 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 GUF1Q8N442 669 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 TERB1Q8NA31 727 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 HMGB4Q8WW32 186 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 OTUB2Q96DC9 234 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 NIF3L1Q9GZT8 377 aa17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCAMP4-203ENST00000411971 A0A1W2PQF6 199 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 TCRBV21S2A2A0A5A6 115 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 TBC1D3BA6NDS4 549 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 KCNK5O95279 499 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 KLKB1P03952 638 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 RARGP13631 454 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 P4HA1P13674 534 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 GABRG2P18507 467 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 DHPSP49366 369 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 KIF11P52732 1056 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 ADAM9Q13443 819 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 C10orf76Q5T2E6 689 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 KIAA1211LQ6NV74 962 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 Q6ZNB5 142 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 TPGS1Q6ZTW0 290 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 ZNF513Q8N8E2 541 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 ERCC4Q92889 916 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 TATDN2Q93075 761 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 NT5C1AQ9BXI3 368 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 FSCN3Q9NQT6 498 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 TLR8Q9NR97 1041 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 PCDH15Q96QU1 1955 aa17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 ATXN2Q99700 1313 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-203ENST00000411971 A0A1W2PQ27 194 aa17.39■□□□□ 0.37
SCAMP4-203ENST00000411971 A0A1W2PQ64 194 aa17.39■□□□□ 0.37
SCAMP4-203ENST00000411971 A0A1W2PQD8 194 aa17.39■□□□□ 0.37
SCAMP4-203ENST00000411971 NEDD8-MDP1E9PL57 170 aa17.39■□□□□ 0.37
SCAMP4-203ENST00000411971 CISD3P0C7P0 127 aa17.39■□□□□ 0.37
SCAMP4-203ENST00000411971 PMS1P54277 932 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-203ENST00000411971 PNOCQ13519 176 aa17.39■□□□□ 0.37
SCAMP4-203ENST00000411971 INTS8Q75QN2 995 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-203ENST00000411971 DEFB119Q8N690 84 aa17.39■□□□□ 0.37
SCAMP4-203ENST00000411971 SLC4A11Q8NBS3 891 aa17.39■□□□□ 0.37
SCAMP4-203ENST00000411971 NDRG1Q92597 394 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-203ENST00000411971 BHMTQ93088 406 aa17.39■□□□□ 0.37
SCAMP4-203ENST00000411971 NACA2Q9H009 215 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms