RNA–Protein interactions for RNA: ENST00000410017.5

COPS7B-206, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-206ENST00000410017 USP4Q13107 963 aa17.1■□□□□ 0.33
COPS7B-206ENST00000410017 SNAPC2Q13487 334 aa17.1■□□□□ 0.33
COPS7B-206ENST00000410017 TRIP10Q15642 601 aa17.1■□□□□ 0.33
COPS7B-206ENST00000410017 LRRC36Q1X8D7 754 aa17.1■□□□□ 0.33
COPS7B-206ENST00000410017 ARPINQ7Z6K5 226 aa17.1■□□□□ 0.33
COPS7B-206ENST00000410017 TMEM126BQ8IUX1 230 aa17.1■□□□□ 0.33
COPS7B-206ENST00000410017 WDTC1Q8N5D0 677 aa17.1■□□□□ 0.33
COPS7B-206ENST00000410017 ARFGAP1Q8N6T3 406 aa17.1■□□□□ 0.33
COPS7B-206ENST00000410017 CMASQ8NFW8 434 aaPredicted RBP17.1■□□□□ 0.33
COPS7B-206ENST00000410017 LRRC39Q96DD0 335 aa17.1■□□□□ 0.33
COPS7B-206ENST00000410017 TIMMDC1Q9NPL8 285 aa17.1■□□□□ 0.33
COPS7B-206ENST00000410017 MAP3K20Q9NYL2 800 aaKnown RBP17.1■□□□□ 0.33
COPS7B-206ENST00000410017 MARCOQ9UEW3 520 aaPredicted RBP17.1■□□□□ 0.33
COPS7B-206ENST00000410017 AGO2Q9UKV8 859 aaKnown RBP17.1■□□□□ 0.33
COPS7B-206ENST00000410017 POMPQ9Y244 141 aa17.1■□□□□ 0.33
COPS7B-206ENST00000410017 PTPRJQ12913 1337 aa17.1■□□□□ 0.33
COPS7B-206ENST00000410017 MEI4A8MW99 385 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 CYB561D2O14569 222 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 STAM2O75886 525 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 CCNE2O96020 404 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 IL1R2P27930 398 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 PRDX6P30041 224 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 FDFT1P37268 417 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 MAGEA8P43361 318 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 SERPINB9P50453 376 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 NLRP11P59045 1033 aaKnown RBP17.09■□□□□ 0.33
COPS7B-206ENST00000410017 HPCAP84074 193 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 MTM1Q13496 603 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 RALGPS1Q5JS13 557 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 STRIP1Q5VSL9 837 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 FBXL19Q6PCT2 694 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 RFX6Q8HWS3 928 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 TAB3Q8N5C8 712 aaPredicted RBP17.09■□□□□ 0.33
COPS7B-206ENST00000410017 CMTM5Q96DZ9 223 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 CEP170P1Q96L14 293 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 CATSPER2Q96P56 530 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 MRPS26Q9BYN8 205 aaKnown RBP17.09■□□□□ 0.33
COPS7B-206ENST00000410017 SLC13A1Q9BZW2 595 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 SMYD3Q9H7B4 428 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 C6orf203Q9P0P8 240 aaPredicted RBP17.09■□□□□ 0.33
COPS7B-206ENST00000410017 CXorf49A8MYA2 514 aaPredicted RBP17.09■□□□□ 0.33
COPS7B-206ENST00000410017 H3BNX3 289 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 DKC1O60832 514 aaKnown RBP eCLIP17.09■□□□□ 0.33
COPS7B-206ENST00000410017 LGR5O75473 907 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 DGAT1O75907 488 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 CLPTM1O96005 669 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 RAG1P15918 1043 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 YWHAZP63104 245 aaKnown RBP17.09■□□□□ 0.33
COPS7B-206ENST00000410017 ROR1Q01973 937 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 CNTN2Q02246 1040 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 SLFN12LQ6IEE8 588 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 BORAQ6PGQ7 559 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 C1orf228Q6PIY5 440 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 RBM44Q6ZP01 1051 aaKnown RBP17.09■□□□□ 0.33
COPS7B-206ENST00000410017 TMC7Q7Z402 723 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 FBXW8Q8N3Y1 598 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 FAF2Q96CS3 445 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 CFAP36Q96G28 342 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 CAMKK2Q96RR4 588 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 POPDC2Q9HBU9 364 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 DNAJC28Q9NX36 388 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 PAK5Q9P286 719 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 ZC3H7BQ9UGR2 993 aaKnown RBP17.09■□□□□ 0.33
COPS7B-206ENST00000410017 TCEAL9Q9UHQ7 104 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 RAB26Q9ULW5 256 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 SF3B1O75533 1304 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■■■■■ 47.9
COPS7B-206ENST00000410017 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
COPS7B-206ENST00000410017 CCDC195A0A1B0GUA6 201 aa17.08■□□□□ 0.33
COPS7B-206ENST00000410017 SETSIPP0DME0 302 aa17.08■□□□□ 0.33
COPS7B-206ENST00000410017 POLR2BP30876 1174 aaKnown RBP17.08■□□□□ 0.33
COPS7B-206ENST00000410017 RFC1P35251 1148 aaPredicted RBP17.08■□□□□ 0.33
COPS7B-206ENST00000410017 NCOA4Q13772 614 aa17.08■□□□□ 0.33
COPS7B-206ENST00000410017 NDUFAF2Q8N183 169 aa17.08■□□□□ 0.33
COPS7B-206ENST00000410017 KCTD6Q8NC69 237 aa17.08■□□□□ 0.33
COPS7B-206ENST00000410017 SHKBP1Q8TBC3 707 aa17.08■□□□□ 0.33
COPS7B-206ENST00000410017 SPATA18Q8TC71 538 aa17.08■□□□□ 0.33
COPS7B-206ENST00000410017 CLEC4DQ8WXI8 215 aa17.08■□□□□ 0.33
COPS7B-206ENST00000410017 RBM38Q9H0Z9 239 aaKnown RBP17.08■□□□□ 0.33
COPS7B-206ENST00000410017 RSAD1Q9HA92 442 aa17.08■□□□□ 0.33
COPS7B-206ENST00000410017 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.08■□□□□ 0.33
COPS7B-206ENST00000410017 RBAKQ9NYW8 714 aaPredicted RBP17.08■□□□□ 0.33
COPS7B-206ENST00000410017 DTNAQ9Y4J8 743 aa17.08■□□□□ 0.33
COPS7B-206ENST00000410017 MYH9P35579 1960 aaKnown RBP17.08■□□□□ 0.32
COPS7B-206ENST00000410017 HNRNPRO43390 633 aaKnown RBP17.08■□□□□ 0.32
COPS7B-206ENST00000410017 SIN3BO75182 1162 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 STBD1O95210 358 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 PIGRP01833 764 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 APOEP02649 317 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 PROCP04070 461 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 KRT3P12035 628 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 CNTFP26441 200 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 SERPINB6P35237 376 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 PTGER2P43116 358 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 MAGEA6P43360 314 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 BAG6P46379 1132 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 GABRB2P47870 512 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 ALDH1A3P47895 512 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 AP3M2P53677 418 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 CREB5Q02930 508 aa17.08■□□□□ 0.32
COPS7B-206ENST00000410017 CYLC2Q14093 348 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms