RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 PCDHAC2Q9Y5I4 1007 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TSC2P49815 1807 aa3.28□□□□□ -1.89
CUL3-204ENST00000409777 CNTNAP2Q9UHC6 1331 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 HMX2A2RU54 273 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 FAM221BA6H8Z2 402 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 TRIM64A6NGJ6 449 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 TRIM64BA6NI03 449 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 H0YJX3 145 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 TRDMT1O14717 391 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 CHADO15335 359 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 GYG2O15488 501 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 NDUFB5O43674 189 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 TLL1O43897 1013 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 EXTL3O43909 919 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 COQ9O75208 318 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 S100BP04271 92 aaPredicted RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 ASLP04424 464 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 PRKCGP05129 697 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 PDHA1P08559 390 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 UQCRBP14927 111 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 HOXA13P31271 388 aaPredicted RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 PHBP35232 272 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 RPL22P35268 128 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 MAGEA12P43365 314 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 CRKP46108 304 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 QARSP47897 775 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 NPTX2P47972 431 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 SERINC3Q13530 473 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 TFDP1Q14186 410 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 TRIP13Q15645 432 aaPredicted RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 ZRSR2Q15696 482 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 HIF1AQ16665 826 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 LIN9Q5TKA1 542 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 IRAK1BP1Q5VVH5 260 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 STEAP4Q687X5 459 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ZNF449Q6P9G9 518 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 CYP4V2Q6ZWL3 525 aaPredicted RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 PTF1AQ7RTS3 328 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 KBTBD6Q86V97 674 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 LCA5Q86VQ0 697 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 LRRC6Q86X45 466 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 CCNJLQ8IV13 435 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 IGDCC3Q8IVU1 814 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 TRIM42Q8IWZ5 723 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 GPD1LQ8N335 351 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 B4GALNT2Q8NHY0 566 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ACTRT2Q8TDY3 377 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 JADE3Q92613 823 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 TEKT1Q969V4 418 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ZNF778Q96MU6 729 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 NDNQ99608 321 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ZNF577Q9BSK1 485 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 FAM126AQ9BYI3 521 aaPredicted RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 NMUR2Q9GZQ4 415 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 NIF3L1Q9GZT8 377 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 MIS12Q9H081 205 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ZNF408Q9H9D4 720 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 FBXO6Q9NRD1 293 aaPredicted RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 TOPORSQ9NS56 1045 aaPredicted RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 LMCD1Q9NZU5 365 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ZNHIT2Q9UHR6 403 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ITGA11Q9UKX5 1188 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 PPM1HQ9ULR3 514 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 HBS1LQ9Y450 684 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 PTPRJQ12913 1337 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 PDCD11Q14690 1871 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 TCRBV9S1A1TA0A576 114 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 FAM159BA6NKW6 160 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 POLRMTO00411 1230 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 CREB3O43889 395 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ALDH1A2O94788 518 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 UPP2O95045 317 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 SPATA31D3P0C874 917 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ZSCAN5DPP0CG00 497 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 CCDC166P0CW27 439 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 MYL4P12829 197 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 GYS1P13807 737 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ETS1P14921 441 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 YBX3P16989 372 aaKnown RBP eCLIP3.27□□□□□ -1.891e-6■□□□□ 11.3
CUL3-204ENST00000409777 PROZP22891 400 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ACAT1P24752 427 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 SFNP31947 248 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 CRHR1P34998 444 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 PGM1P36871 562 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 PIK3CAP42336 1068 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 GABRB2P47870 512 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 INHBCP55103 352 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 WNT7BP56706 349 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 MRPS9P82933 396 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 GAD2Q05329 585 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 GPS1Q13098 491 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 CUL2Q13617 745 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 THOC5Q13769 683 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 FRG1Q14331 258 aaKnown RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 PIGHQ14442 188 aaPredicted RBP3.27□□□□□ -1.89
CUL3-204ENST00000409777 MYBPC3Q14896 1274 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 ACAP1Q15027 740 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 UGCGQ16739 394 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 TKFCQ3LXA3 575 aa3.27□□□□□ -1.89
CUL3-204ENST00000409777 DACT2Q5SW24 774 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms