RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 FRMD5Q7Z6J6 570 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 OSBPL1AQ9BXW6 950 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 OXCT2Q9BYC2 517 aaPredicted RBP8.66□□□□□ -1.02
SCN9A-203ENST00000409672 IGSF9BQ9UPX0 1349 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 EPHX4Q8IUS5 362 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 LPPQ93052 612 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 PMEPA1Q969W9 287 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 HDHD2Q9H0R4 259 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 POLLQ9UGP5 575 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 MAPKBP1O60336 1514 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 CEP170Q5SW79 1584 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 BACE1P56817 501 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 RPL10AP62906 217 aaKnown RBP8.66□□□□□ -1.02
SCN9A-203ENST00000409672 GUCY1A3Q02108 690 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 CACHD1Q5VU97 1274 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 LONP2Q86WA8 852 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 HEATR4Q86WZ0 1026 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 CXorf40AQ8TE69 158 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 OLFM1Q99784 485 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 OSBPL2Q9H1P3 480 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 PDGFCQ9NRA1 345 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 NSMCE4AQ9NXX6 385 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 RPS6KL1Q9Y6S9 549 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 H3BRB1 525 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 AP3D1O14617 1153 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 SGPL1O95470 568 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 FDX1P10109 184 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 HDDC2Q7Z4H3 204 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 CCDC185Q8N715 623 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 SCAIQ8N9R8 606 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 KLHL20Q9Y2M5 609 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 ARP10275 920 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 ATP6V1B2P21281 511 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 GALCP54803 685 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 VPS72Q15906 364 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 FAM83EQ2M2I3 478 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 SDHAF4Q5VUM1 108 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 ATL2Q8NHH9 583 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 UTP15Q8TED0 518 aaKnown RBP8.66□□□□□ -1.02
SCN9A-203ENST00000409672 FERD3LQ96RJ6 166 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 PHACTR1Q9C0D0 580 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 CYLDQ9NQC7 956 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 KCNQ5Q9NR82 932 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 GPRC5DQ9NZD1 345 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 BIKQ13323 160 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 CSHL1Q14406 222 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 NECTIN1Q15223 517 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 EMC1Q8N766 993 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 KLHL23Q8NBE8 558 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 NEK7Q8TDX7 302 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 ZNF333Q96JL9 665 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 SPRTNQ9H040 489 aaPredicted RBP8.66□□□□□ -1.02
SCN9A-203ENST00000409672 TAF1DQ9H5J8 278 aaPredicted RBP8.66□□□□□ -1.02
SCN9A-203ENST00000409672 VANGL2Q9ULK5 521 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 LYVE1Q9Y5Y7 322 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 FFAR2O15552 330 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 SLC2A4P14672 509 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 RAET1GQ6H3X3 334 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 S100A13Q99584 98 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 TM6SF2Q9BZW4 377 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 NMRK1Q9NWW6 199 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 STAP2Q9UGK3 403 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 RCOR1Q9UKL0 485 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 USP18Q9UMW8 372 aa8.66□□□□□ -1.02
SCN9A-203ENST00000409672 COPG1Q9Y678 874 aaKnown RBP8.66□□□□□ -1.02
SCN9A-203ENST00000409672 CEP152O94986 1710 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 TRIM43BA6NCK2 446 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 TP73O15350 636 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 HOXA2O43364 376 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 TPD52L2O43399 206 aaKnown RBP8.65□□□□□ -1.02
SCN9A-203ENST00000409672 CDH8P55286 799 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 RUNX1T1Q06455 604 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 OVGP1Q12889 678 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 RCN1Q15293 331 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 LRRC8BQ6P9F7 803 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 DENND1CQ8IV53 801 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 IQCF2Q8IXL9 164 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 ELMO1Q92556 727 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 WDR41Q9HAD4 459 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 WDR19Q8NEZ3 1342 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.65□□□□□ -1.02
SCN9A-203ENST00000409672 CLTBP09497 229 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 ELNP15502 786 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 PSMA3P25788 255 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 TRAF2Q12933 501 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 FGD3Q5JSP0 725 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 UNC45BQ8IWX7 931 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 FEZF2Q8TBJ5 459 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 CALML6Q8TD86 181 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 FAM172AQ8WUF8 416 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 CAMKK2Q96RR4 588 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 QRICH2Q9H0J4 1663 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 SYN1P17600 705 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 ADSLP30566 484 aaPredicted RBP8.65□□□□□ -1.02
SCN9A-203ENST00000409672 PSMC6P62333 389 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 DSELQ8IZU8 1212 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 PCYOX1LQ8NBM8 494 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 USP6NLQ92738 828 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 SAE1Q9UBE0 346 aaPredicted RBP8.65□□□□□ -1.02
SCN9A-203ENST00000409672 AP4E1Q9UPM8 1137 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms