RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SIX1Q15475 284 aaPredicted RBP13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 HADHQ16836 314 aaKnown RBP13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 SEZ6Q53EL9 994 aa13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 KCTD16Q68DU8 428 aa13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 DRICH1Q6PGQ1 229 aaPredicted RBP13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 CEP120Q8N960 986 aa13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 CASP10Q92851 521 aa13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 CENPTQ96BT3 561 aa13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 DDX27Q96GQ7 796 aaKnown RBP13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 NECTIN4Q96NY8 510 aa13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 OSBPL8Q9BZF1 889 aa13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 UBN1Q9NPG3 1134 aa13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 SNTG2Q9NY99 539 aa13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 GRHL1Q9NZI5 618 aa13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 ASIC3Q9UHC3 531 aa13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 RSPH14Q9UHP6 348 aa13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 EFR3BQ9Y2G0 817 aa13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 WDR87Q6ZQQ6 2873 aa13.52□□□□□ -0.25
SMARCB1-203ENST00000407082 PTPRJQ12913 1337 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 ATXN2Q99700 1313 aaKnown RBP13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 TMEM191CA6NGB0 347 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 MEIS3P2A8K0S8 358 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 NDUFAB1O14561 156 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 RGS16O15492 202 aaPredicted RBP13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 HOXA2O43364 376 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 KRT7P08729 469 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 GRM5P41594 1212 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 GSCP56915 257 aaPredicted RBP13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 KRT17Q04695 432 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 RARS2Q5T160 578 aaKnown RBP13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 ZFYVE27Q5T4F4 411 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 ZDHHC24Q6UX98 284 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 AGMOQ6ZNB7 445 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 MMS22LQ6ZRQ5 1243 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 ABI1Q8IZP0 508 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 C12orf76Q8N812 135 aaPredicted RBP13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 NIPA2Q8N8Q9 360 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 TDRD5Q8NAT2 981 aaKnown RBP13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 TTC13Q8NBP0 860 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 FBXO25Q8TCJ0 367 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 IPO4Q8TEX9 1081 aaKnown RBP13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 ACAP3Q96P50 834 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 NCAPGQ9BPX3 1015 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 MTMR12Q9C0I1 747 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 ADAM7Q9H2U9 754 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 VRTNQ9H8Y1 702 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 RSAD1Q9HA92 442 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 FBXL21Q9UKT6 434 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 DRG1Q9Y295 367 aaKnown RBP13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 GIT1Q9Y2X7 761 aa13.51□□□□□ -0.25
SMARCB1-203ENST00000407082 MYO15AQ9UKN7 3530 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 RECQL4O94761 1208 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 STAU1O95793 577 aaKnown RBP13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 CST3P01034 146 aaPredicted RBP13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 LAG3P18627 525 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 LSP1P33241 339 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 PBX3P40426 434 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 TNFSF9P41273 254 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 MTHFRP42898 656 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 YARSP54577 528 aaKnown RBP13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 KCNC3Q14003 757 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 ZNF268Q14587 947 aaPredicted RBP13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 CLLU1OSQ5K130 101 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 ZBTB41Q5SVQ8 909 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 TTC27Q6P3X3 843 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 GLB1LQ6UWU2 654 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 POLNQ7Z5Q5 900 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 FNIP1Q8TF40 1166 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 CCDC114Q96M63 670 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 CASD1Q96PB1 797 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 TSPAN18Q96SJ8 248 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 NGRNQ9NPE2 291 aaKnown RBP13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 RNF19AQ9NV58 838 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 KLK14Q9P0G3 267 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 ANAPC5Q9UJX4 755 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 NOVA2Q9UNW9 492 aaKnown RBP13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 INPP5FQ9Y2H2 1132 aa13.5□□□□□ -0.25
SMARCB1-203ENST00000407082 NCOR2Q9Y618 2525 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 ARL5CA6NH57 179 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 SIGLEC16A6NMB1 481 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 SMAPO00193 183 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 KIAA0754O94854 1291 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 LMNAP02545 664 aaKnown RBP13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 FLT3P36888 993 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 ADCY8P40145 1251 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 MLH1P40692 756 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 ATP1A2P50993 1020 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 WNT7BP56706 349 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 NOMO2Q5JPE7 1267 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 ATAT1Q5SQI0 421 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 AADACL2Q6P093 401 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 GSTA5Q7RTV2 222 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 PCGF5Q86SE9 256 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 SRLQ86TD4 932 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 PASD1Q8IV76 773 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 SH2D3CQ8N5H7 860 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 DTWD2Q8NBA8 298 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 TLCD1Q96CP7 247 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 ZFP42Q96MM3 310 aa13.49□□□□□ -0.25
SMARCB1-203ENST00000407082 CNTNAP3BQ96NU0 1288 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms